Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2531 ATGGGACATGATAGAAATGAAGTTGAGCTCATTGAAAAAATTATTGAAGTTGTGAATGAGAAGTTGCCGCCTATTTGTCCAAATAAATCCAAAGGTGTTGTTGGAATTGATGAACAAGTTAAGTCTATTGAATCGTTATTGGCAAAAATGGAGCCGAATGAAGTTGGAATCCTTGGAATTTGGGGCATGGGCGGTATAGGTAAAACAACCATTGCTCAAGTTATATTCAATAAATATTCCTCACAGTATGAAGGTTGTTGCTTCTTGAAAAATGTCAGAGAAGAATCAGAAAGGCACGGTCTGGATTATTTGTATGAGCAACTCTTTTCTCAACTACTGAAGAAACAAAATCTCCTTGTGAAAGGTTCTGCCAATGCAATATCTGCCATTTACGAGAGAAGATTGAGTCAGAAAGAAGTTCTCATAGTACTTGACGATGTGGATACATCAGATATATTAGATTATCTAACTGGAGAACAAACCTGCTTGGCACCAGGTAGTAGGGTCATTGTAACAACCAGAGACAAGCAGATACTCATTGCTGCAAGAGCACATGGAATATATGAGGTCAAGCGATTGAGCTTTATGAGCTCCCTTGAGCTTTTTTGCATAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATATAAAAAGCTTTCACAAATGGCAGTTAATTATGCAAATGGCATTCCACTAGCCTTAAAAGTATTGGGTTCTTTTTTATGCTCAAAAAGTGCAGTAGTTTGGAAAAATGCACTAAAAAAACTCCAGAGTTGCCCTGATAAGAGGATTTTCAATGTGTTGAAATTGAGCTACGATGGATTAGATGATTCGGACAAGAGCATATTCCTTGACATTGCATACTTTTTCAAAGGAGAATGCAAAGATAATGTCACAAGATTTCTAGACTCATGTAGTTTCTATGCGGATGTTGGAATAGACAATCTTGAAAGTAAAGCTCTTATAACTATTTCCTACAATAGAATACAAATGCATGACTTGATACAGCAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTACAGAGCTCACTCGAATAAATAAGCCTGAAGATTTTCACAATTTATTGAAAAATAGCAAAGTAAGAACACGGTACCTCCACTCATTTTGTTTTTACTTGTTTTGA 1158 0.3627 MGHDRNEVELIEKIIEVVNEKLPPICPNKSKGVVGIDEQVKSIESLLAKMEPNEVGILGIWGMGGIGKTTIAQVIFNKYSSQYEGCCFLKNVREESERHGLDYLYEQLFSQLLKKQNLLVKGSANAISAIYERRLSQKEVLIVLDDVDTSDILDYLTGEQTCLAPGSRVIVTTRDKQILIAARAHGIYEVKRLSFMSSLELFCIKAFNKSYPENGYKKLSQMAVNYANGIPLALKVLGSFLCSKSAVVWKNALKKLQSCPDKRIFNVLKLSYDGLDDSDKSIFLDIAYFFKGECKDNVTRFLDSCSFYADVGIDNLESKALITISYNRIQMHDLIQQMGWEVVRQESNKDPTELTRINKPEDFHNLLKNSKVRTRYLHSFCFYLF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2531 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 286 IPR027417 -
Ahy12g2531 385 Gene3D - 16 185 IPR027417 -
Ahy12g2531 385 PRINTS Disease resistance protein signature 227 241 - -
Ahy12g2531 385 PRINTS Disease resistance protein signature 134 148 - -
Ahy12g2531 385 PRINTS Disease resistance protein signature 57 72 - -
Ahy12g2531 385 Gene3D - 193 276 IPR042197 -
Ahy12g2531 385 Pfam NB-ARC domain 39 262 IPR002182 GO:0043531
Ahy12g2531 385 SUPERFAMILY "Winged helix" DNA-binding domain 263 365 IPR036390 -
Ahy12g2531 385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 377 IPR044974 GO:0006952
Ahy12g2531 385 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2531 Ahy-Chr12 114278531 114280169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2531 34 349 WRKY Transcription Factor Family AT5G45050 36.278 5.60e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2531 - - ahf:112728444 737.258