Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2513 ATGGCTGCGTCAGTGGGTGGAAGTAGGCTTCAAAGCATGTTGCAAGCTGCAGTTCAATCTGTTCAATGGACCTACAGCCTCTTCTGGCAACTTTGTCCACAACAGATGATTTTGGTTTGGGGGGATGGTTACTACAATGGGGCAATTAAGACAAGGAAGACAGTGCAACCAATGGAGGTTAGTGCTGAGGAGGCGTCTCTCCAAAGAAGCCAACAGCTCAGGGAACTCTATGACTCCTTGTCCGCCGGAGAGACGAATCCGCCCACTCGCCGCCCTTGCGCCGCCTTGTCGCCGGAGGACCTAACAGAATCCGAATGGTTCTATTTGATGTGTGTCTCATTCTCATTTCCTCCTGGTGTTGGGTTGCCGGGAAAGGCATATGCTAGGAGGCAGCATGTATGGCTCACAGGTGCAAACGAGGTGGACAGCAAAACCTTTACCAGAGCTATTCTAGCCAAGAGTGCTCGTATACAGACCGTGGTGTGCATTCCTCTATTGGACGGTGTCGTTGAGTTTGGCACAATAGATAAGGTTCAAGAAGATATTAAGTTTATCCAACACGTGAAGAGTTTTTTCATAGAACACCACCACGCCTCCGTCCATCCTCCGCCGCCGCCGCCGAAGCCAGCCCTCTCAGAGCACTCCACCTCCAATCCTGCATCCTCATCTGACTGTCTCATTTATACCGTAGCGGACCCACCATTACCTCCGCCTAATCTTACCCATGAAGACAATATGGAAGAAGATCAAGACAATGAGGAAGAAGAAGAGGAAGAGGAAGACGAAGATGATGAAGAAGAAGAACCCATATTGGACTCTGAAGATGAAAAGAGACGAAATAATAATAATGTTTCAGGTGGAATTACAGAACCAAGTGAGTTGATGCAATTAGAAATGTCTGAAGATATTAGAGTTGGATCACCTAATGATGGATCAAATAATCTTGATTCCAATTTTCATTTACTAGCCGTTACCGAAGCAGATAATCATTCGGGTCAAGTTGACTCTTATCGAGTTGACCCGACCCAAAGATGGGATCCAATTCAAAGCCCTTTGGATCAACTCCAAGTTCAACTACCAGTCTTTTCACCTATAGAAGATCAAATATTGACACAAGAAGATGATCACTATTCTCAAACTGTATCAAGCATCCTCCAAAATCAATCAACCCGTTGGGCTGAGTCTCCTTCAATAGCATGCTACGTCACTTGCTCCAACCAATCAGCATTCGCCAAGTGGACATCCCTCGTCGCCGACGAACATCTCCACGCCGCCACGGCCGACGGCTCCTCCCAATGGCTCCTAAAATACATCTTATTTACCGTGCCCTACTTACACTCCAACAAAAACAATGAAGAAAACAATAGTTCTCCAAATAACACAAACCCTACCAGCTCAGCCGGTCCGACAGACCGGCTGCGCGGAGGGGGAAAAGGCAGTGGCACTCCGCAGGACGAGCTGAGTGCCAATCACGTCCTGGCGGAGCGCCGCCGCCGTGAGAAGCTAAATGAGAGATTCATCATCCTAAGATCACTTGTCCCATTTGTTACCAAAATGGACAAAGCTTCAATTTTAGGTGACACAATTGAATATGTGAAACAACTTAGAAGGAAGATCCAAGACTTAGAGGCACGTATCCGACAAATGGAAGCTGAACAACAACGTTCGAGGACACCATCAACAACAATTGAAGTTCACCATTGTGGCTCCTCCAACAAGGAGCAACAACAACACACGGTTGTGTTAGGGCATGAGAAGAGGAAGGTGAGGATTGTGGAGGGGACGAAGACCGCAACCAAGGTGGCGGCGGCGGCGGCCACAGAGGCATCGGTGCAGGTTTCGATTATAGAGAGTGATGCATTGTTGGAGTTGGAGTGTAGTCATAGGGAAGGGTTACTACTTGATGTGATGTTGGTGTTAAGAGAGATGAAGATTGAGGTTATTGGGGTTCAATCCTCACTCAACAATGGAGTTTTTGTGGCTGAATTGAGGGCCAAGGTTAAGGACAATAATTGTGGGAAGAAGGTTAGCATTGTGGAAGTCAAGAGGGCATTAAATCAGGTTATACCCCATACTGGTGATTAA 2085 0.4719 MAASVGGSRLQSMLQAAVQSVQWTYSLFWQLCPQQMILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYDSLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFTRAILAKSARIQTVVCIPLLDGVVEFGTIDKVQEDIKFIQHVKSFFIEHHHASVHPPPPPPKPALSEHSTSNPASSSDCLIYTVADPPLPPPNLTHEDNMEEDQDNEEEEEEEEDEDDEEEEPILDSEDEKRRNNNNVSGGITEPSELMQLEMSEDIRVGSPNDGSNNLDSNFHLLAVTEADNHSGQVDSYRVDPTQRWDPIQSPLDQLQVQLPVFSPIEDQILTQEDDHYSQTVSSILQNQSTRWAESPSIACYVTCSNQSAFAKWTSLVADEHLHAATADGSSQWLLKYILFTVPYLHSNKNNEENNSSPNNTNPTSSAGPTDRLRGGGKGSGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQDLEARIRQMEAEQQRSRTPSTTIEVHHCGSSNKEQQQHTVVLGHEKRKVRIVEGTKTATKVAAAAATEASVQVSIIESDALLELECSHREGLLLDVMLVLREMKIEVIGVQSSLNNGVFVAELRAKVKDNNCGKKVSIVEVKRALNQVIPHTGD* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2513 694 SMART finulus 492 541 IPR011598 GO:0046983
Ahy12g2513 694 PANTHER TRANSCRIPTION FACTOR TT8 9 691 - -
Ahy12g2513 694 MobiDBLite consensus disorder prediction 197 294 - -
Ahy12g2513 694 Pfam Helix-loop-helix DNA-binding domain 489 536 IPR011598 GO:0046983
Ahy12g2513 694 MobiDBLite consensus disorder prediction 450 469 - -
Ahy12g2513 694 Coils Coil 525 552 - -
Ahy12g2513 694 MobiDBLite consensus disorder prediction 450 492 - -
Ahy12g2513 694 MobiDBLite consensus disorder prediction 246 271 - -
Ahy12g2513 694 Gene3D - 482 553 IPR036638 GO:0046983
Ahy12g2513 694 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 192 IPR025610 -
Ahy12g2513 694 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 488 559 IPR036638 GO:0046983
Ahy12g2513 694 PANTHER TRANSCRIPTION FACTOR TT8 9 691 - -
Ahy12g2513 694 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 486 535 IPR011598 GO:0046983
Ahy12g2513 694 MobiDBLite consensus disorder prediction 553 578 - -
Ahy12g2513 694 Coils Coil 239 268 - -
Ahy12g2513 694 MobiDBLite consensus disorder prediction 550 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2513 Ahy-Chr12 114037507 114049429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2513 304 691 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 36.990 4.14e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy12g2513 bHLH-MYC_N 4.70E-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2513 - - adu:107475781 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2513 12 114037507 114049429 Ahy12g2513 12 114037507 114049429 ECH