Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2479 ATGCCGTCTTCTTCTTTAGATGTTCCCCAAATCAAATATGACGTGTTCATCAGTTTTAGAGGAGAAGACATCCGTGATAATTTTCTTAGCCACCTGAGAAAAGAATTGCGTCATAACCAAATTGATTTCTTTGTTGACGATGAAAAGGTTCATCCTGGAGATGAAATTTCATCCACACTTCTTGAAGCAATTGAGGGGTCTTACATTTCATTAGTCATCTTCTCGAAACACTATGCTTCTTCAAAATGGTGTATGGAGGAGCTTGTGAGGATAACTGAATGTATGGAAGAATATGAAAGGATTGTGATACCTGTTTTTTACAACGTTGATCCTTCTCATGTAAGACATCAGAAAGGAACTTTTGCAGAGGCTTTTGATGTTCATGAAGAGAAATATAAGATCAGTAGAGAAAAGCTACAAAATTGGAGATCTGTCTTGAAAAAGATTGCTAATTTATCCGGAATTCATTATCCATCAAAATATCGGAATGAATCTGAAGTCATTGATGACATTGTCAAGAGTATATCGGAGAAATTGCCGCATCTTTTGTCAAATGCATCCGAAGGCCTTATTGGAATTGATGAAAATTCAAAATTTCTTCAACCTCTACTGGAAATGGAGTCTGATGAAGTTCGAATTGTGGGAATTTGGGGCATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTTGACAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCACAAAATTCTGGCAAACACGGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGAAGAACATCTCCTTGTGAAGGGATCAGCCCAAGCAAGATCTATGTATGTTAAGAGAAGGTTGAGTCGGAAAAAGGTCTTCATAGTGCTTGACGATGTGGATACATCAGATATATTAGATTATCTAATTATAAAACAAATCTGTTTGGCACCAGGAAGTAGGGTCATTATAACAACTAGAGACGAGCAAGTACTAATTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGAATTGAGCTTTAAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAAAATGGATATGAAAAGCTTTCAAAAATGGCCGTTAATTATGCAAATGGCATTCCATTAGCCTTAGAAGTATTGGGATCCTTTTTATGCTCAAGAAGTGTAGTAGCTTGGGAAAGTGCACTAAGAAAACTCAAGATTCATCCTGATCCAAGCATATTCAAAGTGTTGAAATTGAGTTATGATGGATTAGATGAGTTAGAGAGGAGCATATTCTTAGACATTGCTTTCTTTTTCAAAGGAGAATGCATGGATGATGTCATAAGGTTTCTAGATTCTTGTGATTTCTTTGCAGAGATCGGAATAAACAATCTTGAACGTAAAGCTCTTATAACCATTCGGGGCAAAAGAATAGAAATGCATGACTTGATACAACAGATGGGTTGGGAAATAGTTCGTCAAGAATCAAATACAGACCCTGGAAAGTCACCAAAAATAAATAGAGACCCTGGAAAGCTTAGCAGATTAAGTAGACCTGAGGATTTTTACAATTTATTGAAAAATAGCCAAGAAAATAAATTAGTTGAAGGTATTATGATTGACTTGTCTCAAACTAAAGATCTACACTTGAATGCCAACACCTTCAAAAATATGCCCCGCCTAAGATTTCTTAAACTTCATACTCTCTTGGGTGTAAGATCATCGAATGTGCTAGTTCCTACAGGTCTTGAGGCATTTTCTGATGAACTAAGATATTTGGAGTGGTGTAGATATCCTTTGAGTTCCTTGCCGTCAACATTTTTTGCTGAGAAGCTTGTTGAGTTTAGCATGCCACAGAGTCAGGTTTCTAAACTTTGGGATGGAGTGCAGGATCTTGTGAATTTGAAGATAATTAACCTTTCGCAATGCAACCAGTTGGTGGAACTTCCTGATCTTAGTAAGGCAACAAATCTTGAGGTGTTAGACGTGTCCTTTTGTAAAGGGTTGTGTGAACTTCACCCATCTGTTTTATCCATCCCCACACTTAAAAATTTGAGTCTTTCTTGGTGTCAAAAACTGAACAGTGTTAAAGGGGAGATTCATTCCAAGTCTCTTAAAAGACTTGATTTTGGAGGTTGCTCAAGCCTAGAGGAATTTTCGGTGACATCAGGGGAACTGAGTTGTTTATATTTCATTTTCTCAAGAATTAAGAGTCTTCCAAATGAGCTATGCGGCTTTATAACTCTGGAAGAACTTAATCTTGCTTGTTGCAGCGAGCTAATTGAACTCCCTCACAATCTGAAAGCCTTTTCACGATTGAAAAGTTTGACTCTAAATAGTTGCAGTAGTCTTAGATATATACCTGAACTTCCACCATCTATAGAAAAGTTATTTGCTGCTGACTGCACATCATTGGAATCAATATTCAGTTTAAAGGAAGTATTCAGTTTAAATAGGAGACGTATCTCATTTACGAATTGCATGAGATTGGATAAGGAATCACTGAATGATATTATAGAAGATGCCCATCACACAATATTCAGAAATATGTTGTTGTGGTCATCAGCATCATCTTATGGTTCATGGGTTCCTGATGAAGATGACTGGGACAGTCGCTTCAACTGTGATGTTTGTCATGCAGGGAGTAGTGTGCCGGAGTGGTTCAGATGTCAGAGAGCAGAAGGAGCTTCAGTAACAGTTGAAATAGAACAACCTTACTACCAGCTGTTGGGTTTCTGTTTCTGCTGTGTTCTTTCTCAAGAGTTCTCCGACGATCACTCTATCCTTTGTGAATATGACTTGGGAGATGGTGTAAAGTATCCAGGTGGAAGTTTTATGCCATTCGGTGTAGGGAAAAGATGGATCTCTGATCGTGTTCTTCTATGGTTCAACCTATTAAAGAGTACCCGAATATTGAGGGACATTGAAAAGTACACAGGCAGTGATGATCATGGCACCACTTGCAACCAAACCATTACATTCAGATTCAGTGCAAAAACATATTTATTTGAACAAGAGGATCCTGTGATTAAAGAGTGTGGGGTTTTTCCAATATATGCCTCAGATGTCCTTGATCTCATCGCAAGACTGGAACTGGAGTTCGACTTGAACCCTCATCATAAATCTGCGGTGTGGAAGGTTCTTGGAGATTGGGATCTCGATGCACTGAAAAGTAGGCTCATTCAGAAGATTAAAGAAAAATCAATCTGCTTTCAATCTGATAGTATCTGGGACTCAGAAGAAGTAAGCTGGAGTGACTTAGAAGAAGCAAGTTGGAGTGACTCAGAAGAAGAATGA 3318 0.3803 MPSSSLDVPQIKYDVFISFRGEDIRDNFLSHLRKELRHNQIDFFVDDEKVHPGDEISSTLLEAIEGSYISLVIFSKHYASSKWCMEELVRITECMEEYERIVIPVFYNVDPSHVRHQKGTFAEAFDVHEEKYKISREKLQNWRSVLKKIANLSGIHYPSKYRNESEVIDDIVKSISEKLPHLLSNASEGLIGIDENSKFLQPLLEMESDEVRIVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQNSGKHGLYEKLISELLEEEHLLVKGSAQARSMYVKRRLSRKKVFIVLDDVDTSDILDYLIIKQICLAPGSRVIITTRDEQVLIAARVHAIYKVQELSFKSSLELFCLKAFHKSYPENGYEKLSKMAVNYANGIPLALEVLGSFLCSRSVVAWESALRKLKIHPDPSIFKVLKLSYDGLDELERSIFLDIAFFFKGECMDDVIRFLDSCDFFAEIGINNLERKALITIRGKRIEMHDLIQQMGWEIVRQESNTDPGKSPKINRDPGKLSRLSRPEDFYNLLKNSQENKLVEGIMIDLSQTKDLHLNANTFKNMPRLRFLKLHTLLGVRSSNVLVPTGLEAFSDELRYLEWCRYPLSSLPSTFFAEKLVEFSMPQSQVSKLWDGVQDLVNLKIINLSQCNQLVELPDLSKATNLEVLDVSFCKGLCELHPSVLSIPTLKNLSLSWCQKLNSVKGEIHSKSLKRLDFGGCSSLEEFSVTSGELSCLYFIFSRIKSLPNELCGFITLEELNLACCSELIELPHNLKAFSRLKSLTLNSCSSLRYIPELPPSIEKLFAADCTSLESIFSLKEVFSLNRRRISFTNCMRLDKESLNDIIEDAHHTIFRNMLLWSSASSYGSWVPDEDDWDSRFNCDVCHAGSSVPEWFRCQRAEGASVTVEIEQPYYQLLGFCFCCVLSQEFSDDHSILCEYDLGDGVKYPGGSFMPFGVGKRWISDRVLLWFNLLKSTRILRDIEKYTGSDDHGTTCNQTITFRFSAKTYLFEQEDPVIKECGVFPIYASDVLDLIARLELEFDLNPHHKSAVWKVLGDWDLDALKSRLIQKIKEKSICFQSDSIWDSEEVSWSDLEEASWSDSEEE* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2479 1105 Gene3D - 349 432 IPR042197 -
Ahy12g2479 1105 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Ahy12g2479 1105 Pfam Leucine Rich Repeat 618 637 IPR011713 -
Ahy12g2479 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Ahy12g2479 1105 MobiDBLite consensus disorder prediction 502 521 - -
Ahy12g2479 1105 Gene3D Ribonuclease Inhibitor 527 712 IPR032675 -
Ahy12g2479 1105 SUPERFAMILY L domain-like 544 831 - -
Ahy12g2479 1105 Gene3D - 8 179 IPR035897 -
Ahy12g2479 1105 SUPERFAMILY "Winged helix" DNA-binding domain 420 503 IPR036390 -
Ahy12g2479 1105 ProSiteProfiles TIR domain profile. 11 179 IPR000157 GO:0007165
Ahy12g2479 1105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 939 IPR044974 GO:0006952
Ahy12g2479 1105 Gene3D - 180 343 IPR027417 -
Ahy12g2479 1105 SMART till_3 12 152 IPR000157 GO:0007165
Ahy12g2479 1105 Pfam C-JID domain 887 1030 IPR045344 -
Ahy12g2479 1105 PRINTS Disease resistance protein signature 383 397 - -
Ahy12g2479 1105 PRINTS Disease resistance protein signature 290 304 - -
Ahy12g2479 1105 PRINTS Disease resistance protein signature 637 653 - -
Ahy12g2479 1105 PRINTS Disease resistance protein signature 213 228 - -
Ahy12g2479 1105 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 939 - -
Ahy12g2479 1105 Pfam TIR domain 12 185 IPR000157 GO:0007165
Ahy12g2479 1105 Gene3D Ribonuclease Inhibitor 713 850 IPR032675 -
Ahy12g2479 1105 Pfam NB-ARC domain 199 415 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2479 Ahy-Chr12 113696738 113702611 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2479 13 796 WRKY Transcription Factor Family AT4G12020 32.368 5.58e-100 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2479 - - ahf:112728390 2204.48