Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2477 ATGGCATATTCTCCTTTCTCTAGTTCATCTGCTTTCAATGTTCCTCTAATCAAACATGATGTCTTCGTCAGTTTTCGAGGAATAGACATTCGCACTTCTTTTCTTAGTCATTTGACGAAAGACTTGCATCGTAATCAAATTGATTTCTTTGTTGACGATGAAAAGCTTCATCCGGGAGATGAGATTTCACCCACCCTCCTTCGAGCAATTGAGCAATCATACATTTCATTGGTCATCTTCTCCAAACACTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTGAAGATTATTGAATGCATGGAACAATATAAAAGGATTGTGATACCTGTTTTTTATAATGTTGATCCTTCTCATGTAAGGCATCAAAAAGGAATTTTGGCAGAAGCTTTTGATGTCCACAAAGAGAGATATGAAGAGGAAATTATGCAGAGTTGGAAATCTGTTTTGAAAAAGACGGCAAATTTATCTGGAATTCATTATCCATCGAAATATCGAAATGAATCAGAACTAATCGAAGATATTGTCAAGAATATTTCGGAGAAATTGTCGCATCTTTTGTCAAATGCATCCGAAAGCCTTATTGGAATTGATGAAAAATTAAACTCTCTTGAACGTCTAATGGAAATGGACCCTGAAGAAGTTCGAATTTTGGGAATTTGGGGCATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTCGACAGATGTGCCTCTCGATATGAAGGTTGTTGCTTTCTACAAAATATAAGAGAAGAATTACAAAAGTCTGGTGAACACAGCTTATATGAGAAACTTATTTCTGAACTACTTGAAGGAGAACATCTCCTTGTAAAGGGATCAGCCCATGCAAGATCTATGTATGTTAAGAGAAGGTTGAGTCGGAAGAAGGTCTTCATAGTGCTTGACGATGTGGATACATTAGATATATTAGATTATCTAACTATAAAACAAATCTGTTTGGCACCAGGAAGTAGGGTCATTATAACAACTAGAGACGAGCAACTAACTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGTATTGAGTTTTAAGAGTTCCCTTGAGCTCTTTTGCTTAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATACAAAGAGCTTTCAGAAATGGCAGTTAATTACACAAAGGGCAATCCATTAGCATTAAAAGTATTGGGATCCTTTCTATACTCAAGGAGCATAAAAGAATGGGAAAGTGCATTGAAAAAACTCAAGGTTCATCTCAATGTGGACATCTACAATGTCTTAAAATTGAGTTATGATGGTTTAGATGATTCAGATAAGAACATATTCCTTGACATTGCATTCTTTTTCAGAGGAGAATACAAGGATAATGTCATAAGGTTTCTAGACTGTTGTGGTTTCTTTGGCGACATTGGTATAAGCACTCTTCAGCGTAAAGCTCTTATAACTATTTTCGGCGATAAAATAGTAATGCATGACTTGATACAACAAATGGGTTGGGAAGTTGTTCGCCAAGAATCAAATAAAGATTCTGGAAAGCTCACTCGAATAAATAAACCTGAAGATTTCTGCAACTTATTGAAAAGTAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTAAATAAGAACACATTTAAAAATATGCCTCGTCTAAGATTTCTTAAGTTTTATGCTCCTTGGTATCGAAGACAGTGCAAAGTCTATGTTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCAGCTATTTGGAGTGGAATAGTTGTCCTCTGAATTCTCTACCATCAAGGTTTTGTGTAGAGAAACTTGTTGAGCTTAGGATGACTAACAGTAAAATTTCTAAACTCTGGGATGGAGCACAGAATCTTGTGAGTTTGACAAACCTTGACCTTGGTGGATGTATAAAGTTGGTAGAGCTCCCAGACTTGAGTAAAGCAACAAAGCTTAAAAGGTTAAACCTAAAGGGTTGTGAAAATCTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGGATTGTATCTTGATGGTTGCAAAAAATTGAAGAGTGTCAAAGGCAACATATATTTGAAGTCTCTTAAAACACTCAGGGTTCGAATGTGCTCAAGGCTGGAGGAATTTTCGGTGTCGTCAGAGAAACTGACGGCTTCGTGTTTCTCTTTGTTAAGAATTAAGAGTCTACCAAATGAATTCTGTTGCTCTATATATCTTCGGTATCTTTTTCTTTTCCAATGTAGAGAGCTAATTGAGCTTCCACACAACATTAAAACCCTATCAAGGTTAGTGACTCTTGACGTAAGAGGTTGTTGTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTGAAGTGCTTCTTGCTAATGACTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGTATTTAGTTTGAACAGAAGACAGATCTCATTTGAAAATTGCGTGAAATTGGAAGAGCAGTCGCTGAATGATATTGGTGAAGATGCCCATCTCACAATATTGAAAAATGTTTTGTTTTTTTTAACAGGTCAATATCAGATGATAAATTATTATGATTATCGTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGTATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCACTTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACATACCGCCTCCTTATTTTAATAAATTGGGTACTCTCAATATTAGGTGTGAATACGGCCACGTCGGAGATGATGTAAAGCACACATTTCTAATTACAAGGCTAAACTTTGTTCCTGAAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACTTATCAATTTCCTGAGGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGCACTAGCAACCAAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGAATATGAGAAGAGAGTAGAAGAAAGGAAAAAACAGGTTTTTATCAAAGGGTGTGGGGTTTTGCCAATTTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTCCAAGTTGCAGTTGAACCCTCATCGTCATAACTCCATCACAAGGCAGAGTATAGACGCACTGAAAAGCAAGATGATCCGGAAGATTAAAGGAAAATCACATCGACTCCTGAAGAAGTAA 3243 0.3706 MAYSPFSSSSAFNVPLIKHDVFVSFRGIDIRTSFLSHLTKDLHRNQIDFFVDDEKLHPGDEISPTLLRAIEQSYISLVIFSKHYASSRWCMEELVKIIECMEQYKRIVIPVFYNVDPSHVRHQKGILAEAFDVHKERYEEEIMQSWKSVLKKTANLSGIHYPSKYRNESELIEDIVKNISEKLSHLLSNASESLIGIDEKLNSLERLMEMDPEEVRILGIWGMGGIGKTTIARAIFDRCASRYEGCCFLQNIREELQKSGEHSLYEKLISELLEGEHLLVKGSAHARSMYVKRRLSRKKVFIVLDDVDTLDILDYLTIKQICLAPGSRVIITTRDEQLTAARVHAIYKVQVLSFKSSLELFCLKAFNKSYPENGYKELSEMAVNYTKGNPLALKVLGSFLYSRSIKEWESALKKLKVHLNVDIYNVLKLSYDGLDDSDKNIFLDIAFFFRGEYKDNVIRFLDCCGFFGDIGISTLQRKALITIFGDKIVMHDLIQQMGWEVVRQESNKDSGKLTRINKPEDFCNLLKSSEEKSLVEGIMIDLSQIGDLHLNKNTFKNMPRLRFLKFYAPWYRRQCKVYVPTTLDPFPAKLSYLEWNSCPLNSLPSRFCVEKLVELRMTNSKISKLWDGAQNLVSLTNLDLGGCIKLVELPDLSKATKLKRLNLKGCENLCQLHPSILSIQTLEGLYLDGCKKLKSVKGNIYLKSLKTLRVRMCSRLEEFSVSSEKLTASCFSLLRIKSLPNEFCCSIYLRYLFLFQCRELIELPHNIKTLSRLVTLDVRGCCSLRSIPELPPSIEVLLANDCTSLERIFSLKAVFSLNRRQISFENCVKLEEQSLNDIGEDAHLTILKNVLFFLTGQYQMINYYDYRRMDGRICYPGYKVPEWFVCQTTEASITIELDQPYYHLLGFIFCCVVSQNIPPPYFNKLGTLNIRCEYGHVGDDVKHTFLITRLNFVPERRRNSEDHVFIWTYQFPEEDMFREIEMCDDDDSTSNQKMSFRFSVDRPEYEKRVEERKKQVFIKGCGVLPIYASTVVDVIQKLELESKLQLNPHRHNSITRQSIDALKSKMIRKIKGKSHRLLKK* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2477 1080 Gene3D - 183 350 IPR027417 -
Ahy12g2477 1080 Pfam TIR domain 18 191 IPR000157 GO:0007165
Ahy12g2477 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 158 IPR035897 -
Ahy12g2477 1080 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Ahy12g2477 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 918 - -
Ahy12g2477 1080 SUPERFAMILY "Winged helix" DNA-binding domain 422 526 IPR036390 -
Ahy12g2477 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 918 IPR044974 GO:0006952
Ahy12g2477 1080 Pfam C-JID domain 876 1030 IPR045344 -
Ahy12g2477 1080 SUPERFAMILY L domain-like 537 830 - -
Ahy12g2477 1080 Pfam NB-ARC domain 204 421 IPR002182 GO:0043531
Ahy12g2477 1080 PRINTS Disease resistance protein signature 294 308 - -
Ahy12g2477 1080 PRINTS Disease resistance protein signature 386 400 - -
Ahy12g2477 1080 PRINTS Disease resistance protein signature 768 784 - -
Ahy12g2477 1080 PRINTS Disease resistance protein signature 217 232 - -
Ahy12g2477 1080 Pfam Leucine Rich Repeat 611 630 IPR011713 -
Ahy12g2477 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 445 IPR027417 -
Ahy12g2477 1080 Gene3D - 351 435 IPR042197 -
Ahy12g2477 1080 Gene3D - 17 182 IPR035897 -
Ahy12g2477 1080 Gene3D Ribonuclease Inhibitor 507 699 IPR032675 -
Ahy12g2477 1080 Gene3D Ribonuclease Inhibitor 700 840 IPR032675 -
Ahy12g2477 1080 SMART till_3 18 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2477 Ahy-Chr12 113638786 113645718 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2477 3 789 WRKY Transcription Factor Family AT4G12020 31.297 1.67e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2477 - - ahf:112728390 1271.14