Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2469 ATGGCATATTCTCCTTTCTCTAGTTCATCTGCTTTCAATAATGTTCCTCTAATCAAACATGATGTTTTCCTCAGTTTTCGAGGAACAGACATTCGCACTTCTTTGCTTAGTCATTTGACAACAGACTTGAAGCGTAATCAAATTGATTTCTTTGTTGACGATGAAAAGCTTCATCCTGGAGATGAGATTTCATCCACCCTCCTTCGAGCAATTGAGCAATCATACATCTCATTGGTTATCTTCTCGGAACACTATGCTTCTTCAAGATGGTGTATGGAGGAGCTTGTGAAGATTATTGAATGCATGGAACAGTATGAAAGGATTGTGATACCTGTTTTTTATAATGTTGATCCTTCTCATGTAAGGCATCAAAAAAGAACTTTTGCAGAGGCTTTTGATGTCCACAAAGAGAGATATGAAGAGGAAATTATGCAGAGTTGGAAATCTGTTATGAAGAAGACGGCAAATTTATCTGGAATTCATTATCCATCCAAATATCGAAATGAATCAGAACTCATCCAAGATATTGTCAAGAATATTTCGGAAAAATTGTCGCATCTTTTTTCAAATGCACCCCAAGACCTTGTCGGAATTGATGAGCATTTTAAATTTCTTCAACCTTTAATGGCAATGGAGTCTGATGAAGTTCGAACTGTGGGGATTTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTCGACAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCACAAAAGTCTGGTAAACACAGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGGAGAACATCTTGTGAAGGGATCAGCCCATGAAAGATCTATGTATGTCAAGAGAAAGTTGAGTCGGAAAAAGGTGCTCATAGTGCTTGATGATGTGGATGCATTAGACAAGTTAGATTATCTAACAAGAGAAGCAATCTGTCTGGGAGCAGGTAGTAGGGTCATTGTAACAACAAGAGACGAGCAAGTACTAATTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGAATTGAGCTTTAAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAACATGGATATGAAGAGCTTTCAAAAATGGCAGTTAATTACACAAAGGGCAATCCATTAGCATTAAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGAAAAGTGCATTGAAAAAACTCAGGGTTCATCCCAATGTGGAGATCTACAATGTCTTAAAATTGAGTTATGATGGATTAGATGATTCAGATAAGAACATATTCCTTGACATTGCATTCTTTTTCAGAGGAGCATACAAGGATAATGTTATAAGGTTTCTAGACTCGTGTGATTTCTTTGGCGACATTGGAATAAGCACTCTTGAGCGTAAAGCTCTTATAACTATTTTCAGCGATAGAATAGAAATGCATGATTTGATACAACAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTGGAAAACTCACTCGAATAAATAAACCTGAAGATTTCTGCAACTTATTGAAAAATAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTAAATGCGGACACCCTTACAAATATGCCTCGTCTAAGATTTCTTAAGTTTTATGATCCTTCGGATCAAAGACAGTCCAAAGTCTACATTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCAGCTATCTGGAGTGGAATAGTTGTCCTCTGAATTATCTACCATTAAGGTTTTGTGCAGAGAAACTTGTTGAGCTTAGGATGCCTTACAGTCAAACTTCTAAACTCTGGGATGGAGCACAGAATCTTGTGAATTTGACAAGGCTTGAACTTGGTGGATGTAAAAAGTTGGTAGAGCTCCCAGACTTCAGTAAAGCAACAAAGCTTATATCGATAGATCTTTGTAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGGATTGTTTCTTGATGGTTGCAAAAAATTGAAGAGTGTCAAAAGCAACATATATTTGAAATCTCTAAAAGTACTCGGGGTTCAAAAGTGCTCAAGCCTGGAGGAATTTTCGGTGTCATCAGAGAAACTGACGACTTCGTATTTCTCTTTGTTGAGAATTAAGAGCTTACCACATGAATTCTATTGCTCTACATATCTTGTGTGTCTTGTTCTTTGGGATTGCAGAGAGCTAATTGAGCTTCCACACCATATCAAAACACTATCAAGCTTATTGACTCTTGACGTAAGTGGCTGTTGTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTCAAGTGCTTCTTGCTAATGGGTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGCATTTAGTTTGAACAGAAGACAGATCTCATTTGAAAATTGCGTGAAATTGGAAGAGGAGTCGCTGAATGATATTACGGAAGATGCCCATCTCACAATATTGAAAAATGTTTTGTTTTCTTTGACAGGTCATTATCCGATGATAAATTATTATCATTATCCTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGGATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCAGTTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACGTACCTCCTCCTTCTTTTAATAAATGGGGTACTCTCAATATCAGGTGTGAATACCGCCACTTCGGAGATGATGTTAAGCACACATTTCTAATTATAAGGCAAATCTTTGTTCCTGGAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACTTATCAATTTCCTGATGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGCACTAGCAACCAAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGATGAATATGGGAGAGTAGAAGAAAGGAAAAAACAGGTTTTTATCAAAGGGTGTGGGGTTTTGCCAATGTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTTCAACTTGCAGTTGAACCCTCATCATCATAACTCCATCACAAGGCAGAGTATGGACGCACTGAAAAGCAAGATGATCCGGATGATTAAAGGAAAATCACATCGACTCCTGAAGAAGTAA 3246 0.3789 MAYSPFSSSSAFNNVPLIKHDVFLSFRGTDIRTSLLSHLTTDLKRNQIDFFVDDEKLHPGDEISSTLLRAIEQSYISLVIFSEHYASSRWCMEELVKIIECMEQYERIVIPVFYNVDPSHVRHQKRTFAEAFDVHKERYEEEIMQSWKSVMKKTANLSGIHYPSKYRNESELIQDIVKNISEKLSHLFSNAPQDLVGIDEHFKFLQPLMAMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQKSGKHSLYEKLISELLEGEHLVKGSAHERSMYVKRKLSRKKVLIVLDDVDALDKLDYLTREAICLGAGSRVIVTTRDEQVLIAARVHAIYKVQELSFKSSLELFCLKAFHKSYPEHGYEELSKMAVNYTKGNPLALKVLGSFLHSRSIKEWKSALKKLRVHPNVEIYNVLKLSYDGLDDSDKNIFLDIAFFFRGAYKDNVIRFLDSCDFFGDIGISTLERKALITIFSDRIEMHDLIQQMGWEVVRQESNKDPGKLTRINKPEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLNADTLTNMPRLRFLKFYDPSDQRQSKVYIPTTLDPFPAKLSYLEWNSCPLNYLPLRFCAEKLVELRMPYSQTSKLWDGAQNLVNLTRLELGGCKKLVELPDFSKATKLISIDLCNCEKLCQLHPSILSIQTLEGLFLDGCKKLKSVKSNIYLKSLKVLGVQKCSSLEEFSVSSEKLTTSYFSLLRIKSLPHEFYCSTYLVCLVLWDCRELIELPHHIKTLSSLLTLDVSGCCSLRSIPELPPSIQVLLANGCTSLERIFSLKAAFSLNRRQISFENCVKLEEESLNDITEDAHLTILKNVLFSLTGHYPMINYYHYPRMDGRICYPGYKVPEWFGCQTTEASITIELDQPYYQLLGFIFCCVVSQNVPPPSFNKWGTLNIRCEYRHFGDDVKHTFLIIRQIFVPGRRRNSEDHVFIWTYQFPDEDMFREIEMCDDDDSTSNQKMSFRFSVDRPDEYGRVEERKKQVFIKGCGVLPMYASTVVDVIQKLELEFNLQLNPHHHNSITRQSMDALKSKMIRMIKGKSHRLLKK* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2469 1081 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Ahy12g2469 1081 Gene3D - 18 184 IPR035897 -
Ahy12g2469 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 159 IPR035897 -
Ahy12g2469 1081 Gene3D - 185 347 IPR027417 -
Ahy12g2469 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 918 IPR044974 GO:0006952
Ahy12g2469 1081 SMART till_3 19 157 IPR000157 GO:0007165
Ahy12g2469 1081 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Ahy12g2469 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 918 - -
Ahy12g2469 1081 SUPERFAMILY "Winged helix" DNA-binding domain 423 527 IPR036390 -
Ahy12g2469 1081 Pfam NB-ARC domain 207 422 IPR002182 GO:0043531
Ahy12g2469 1081 Pfam C-JID domain 877 1030 IPR045344 -
Ahy12g2469 1081 PRINTS Disease resistance protein signature 294 308 - -
Ahy12g2469 1081 PRINTS Disease resistance protein signature 769 785 - -
Ahy12g2469 1081 PRINTS Disease resistance protein signature 387 401 - -
Ahy12g2469 1081 PRINTS Disease resistance protein signature 218 233 - -
Ahy12g2469 1081 Gene3D Ribonuclease Inhibitor 702 849 IPR032675 -
Ahy12g2469 1081 Gene3D Ribonuclease Inhibitor 518 701 IPR032675 -
Ahy12g2469 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 446 IPR027417 -
Ahy12g2469 1081 Gene3D - 353 436 IPR042197 -
Ahy12g2469 1081 Pfam TIR domain 19 193 IPR000157 GO:0007165
Ahy12g2469 1081 SUPERFAMILY L domain-like 538 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2469 Ahy-Chr12 113448450 113457830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2469 3 790 WRKY Transcription Factor Family AT4G12020 31.328 3.65e-98 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2469 - - ahf:112728390 1266.91