Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2461 ATGAAAGGCAACATGACCTCTAGGACATTGCTACTTTTCTTGGCCTTAATGGTGACAAATTCAATTGCTATCATGGACAAACAGACATATATAGTACACATGGACAAGACCAAGATCAAATCCTCAATTCATTCACAAGACAGCACTAAACCATGGTTTCAATCTGTCATTGATTTCATCACTGAGGTTTCAGTGCAAGAAGATGAAGAGGAAATAGCTCCTCAGCTTCTTTATGTCTATGAAACCAACATGTTTGGTTTTTCTGCACATCTTTCAAGTAAACAACTTGAATACTTGAACCAAGTTGATGGTTTCCTTGCAGCAATGCCTGATGAGCTATTAACCCTTCACACAACACACACCCCACATTTTCTTGGCCTACAAAATGGGAGAGGACTTTGGAGTGCTCCTAGTTTGGCCTCTGATGTGATCGTAGGGATCCTTGACACCGGTATATGGCCGGAACACATCAGTTTCCAAGACACTGGTTTGACCGAAGTACCCTCTAGATGGAAAGGTTCTTGTGAAGAAGGGACCAAGTTCTCTGCCTCAAATTGTAACAAGAAGCTAATTGGAGCAAGAGCCTTTTATAAAGGGTATGAAAAAGTTATCGGGAGAATCAATGAAACGCTGGATTATCGTTCGCCAAGAGATTCTCAAGGGCATGGAACACACACAGCCTCAACTGCAGCCGGTAACATGGTGAACAATGCAAGCCTATTCGGCATGGCTAAAGGTTCAGCAAGTGGAATGAGGTATACCTCAAAAGTTGCGGCTTATAAAGTATGCTGGCCACTAGGCTGCGCCAATTCGGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGGGTAGACATATTGTCACTCTCTTTAGGCGGCATTGCAAAGCCTTACTACAATGATAGTATTGCCATAGCTTCATTTGGGGCAACTCAAAATGGAGTTTTTGTTTCTTGCTCTGCAGGGAATTCGGGCCCTTTCAGATCAACCGTTGGAAATGTTGCACCATGGATCATCACTGTTGCTGCTAGCTACACTGATAGAAGCTTTCCAACCAAAGTGAAGCTAGGGAATGGACAGGTTTTCAAAGGGGCATCTTTGTATCATGGCAAGACAATCCAATTGCCTCTTGTGCATGCTAATACCACAGGAACACAAAGGACAGCACAATTTTGCACCAAAGGTTCACTTGATCCAAAGCTAGTCCATGGAAAAATAGTTGCTTGTGAACGAGGAATGAATTCCAGAACTGAAAAGGGCGAGGTGGTGAAAATGGCAGGCGGGGCAGGAATGCTACTACTAGTGAATCAAGGAGAAGAGCTTTTTGCTGACTCTCACATTTTGCCAGCAACTTCCTTAGGTGCCTCAGCAAGCAATGCAATTCGGAACTACATCCACTCTGCCAAATCTCCAACAGCTTCAATTTCATTCATAGGAACAATGTATGGTGACCCTGCACCAGTTATGGCAGGATTTTCTGCTAGAGGGCCAAGTATAGTGGGGCCAGATGTGATTAAACCAGATGTAACTGCACCTGGTGTGAACATCTTGGCTTCATGGCCACCATTAACTGCTCCAAGCCTGCTTAAGAGTGACAAAAGGCGTGTGCTATATAACATAGTTTCCGGCACCTCGATGTCTTGCCCTCATGTTACCGGCATAGCAGCACTTCTCAAATCTGTGCACAAAGATTGGTCACCAGCAGCTATCAAATCTGCACTGATGACCACAGCTTACACAGTGAACAACAGAGGTTCCCCTCTTTTAGACATTGCATCGAACACCTCATCTGCATTCGCCAACCCTTTTGCATTTGGTTCAGGCCATGTCAACCCAGAATGTGCCTCTGATCCAGGGTTAGTCTATGATATCACCAACAAAGATTACCTAAACTACTTGTGCAGCCTTAACTATACTCCTACCCAAATTGCTATAATCTCAAAGGGTCATTTCAAATGCTCCAAAGATACATTTTTTCAACTTGGTGACCTAAACTACCCTTCATTTTCTGTCTCATTTGACATAAATGGCACAAATTCTAGTGTTACATACAAGAGGGTAGTCACAAATGTTGGATATCCTAGTAGTTCTTATACAGTGAAAGTTGAAGAACCAAATGGAGTATCAGTTAAGGTTGAACCAAGGAATTTGAGGTTTGGAAAATTAGGTGAGAAATTGAATTATAGTGTGACTTTTGTTGCAAATGGAGGAACAACAATAAGTGACACTTCAACATTTGGATCATTGACTTGGGTGTCAGGCAAGTACAATGTTAGAAGCCCTATAGCAATAACCTGGCAATAG 2307 0.4287 MKGNMTSRTLLLFLALMVTNSIAIMDKQTYIVHMDKTKIKSSIHSQDSTKPWFQSVIDFITEVSVQEDEEEIAPQLLYVYETNMFGFSAHLSSKQLEYLNQVDGFLAAMPDELLTLHTTHTPHFLGLQNGRGLWSAPSLASDVIVGILDTGIWPEHISFQDTGLTEVPSRWKGSCEEGTKFSASNCNKKLIGARAFYKGYEKVIGRINETLDYRSPRDSQGHGTHTASTAAGNMVNNASLFGMAKGSASGMRYTSKVAAYKVCWPLGCANSDILAAMDQAVADGVDILSLSLGGIAKPYYNDSIAIASFGATQNGVFVSCSAGNSGPFRSTVGNVAPWIITVAASYTDRSFPTKVKLGNGQVFKGASLYHGKTIQLPLVHANTTGTQRTAQFCTKGSLDPKLVHGKIVACERGMNSRTEKGEVVKMAGGAGMLLLVNQGEELFADSHILPATSLGASASNAIRNYIHSAKSPTASISFIGTMYGDPAPVMAGFSARGPSIVGPDVIKPDVTAPGVNILASWPPLTAPSLLKSDKRRVLYNIVSGTSMSCPHVTGIAALLKSVHKDWSPAAIKSALMTTAYTVNNRGSPLLDIASNTSSAFANPFAFGSGHVNPECASDPGLVYDITNKDYLNYLCSLNYTPTQIAIISKGHFKCSKDTFFQLGDLNYPSFSVSFDINGTNSSVTYKRVVTNVGYPSSSYTVKVEEPNGVSVKVEPRNLRFGKLGEKLNYSVTFVANGGTTISDTSTFGSLTWVSGKYNVRSPIAITWQ* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2461 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 19 768 - -
Ahy12g2461 768 Gene3D Peptidase S8/S53 domain 142 630 IPR036852 GO:0004252|GO:0006508
Ahy12g2461 768 Gene3D - 348 483 - -
Ahy12g2461 768 SUPERFAMILY Subtilisin-like 116 621 IPR036852 GO:0004252|GO:0006508
Ahy12g2461 768 Pfam PA domain 376 461 IPR003137 -
Ahy12g2461 768 Pfam Fibronectin type-III domain 664 765 IPR041469 -
Ahy12g2461 768 ProSiteProfiles Serine proteases, subtilase domain profile. 121 617 - -
Ahy12g2461 768 Pfam Peptidase inhibitor I9 29 117 IPR010259 -
Ahy12g2461 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Ahy12g2461 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 117 IPR037045 -
Ahy12g2461 768 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Ahy12g2461 768 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Ahy12g2461 768 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Ahy12g2461 768 CDD Peptidases_S8_3 114 580 IPR034197 -
Ahy12g2461 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 768 IPR045051 -
Ahy12g2461 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Ahy12g2461 768 Gene3D - 634 767 - -
Ahy12g2461 768 CDD PA_subtilisin_like 355 476 - -
Ahy12g2461 768 Pfam Subtilase family 141 584 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2461 Ahy-Chr12 113315698 113318628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2461 27 768 Subtilisin-like Serine Gene Family AT1G01900 55.823 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2461 - - aip:107626028 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2461 12 113315698 113318628 Ahy2g2128 2 96754343 96757212 hybridization