Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2460 ATGCCGCCGCATCGCCACTGCCCGCCACTTCTTCTTCTTCTTCCCGCCGCCGCACCGCTGTCCGCCGCTTCTTCTTCTTCTTCTTACCGCCGATCCCACCGCCAAACCGCCGCCCGCCGCCTGCCGCTTCTTCTTCTCGCCGCCACACCGCTGCCCAACTTTTACATTGTTTTCTTAGGAGATCATCCTCTTATTAGAGACAATGCACATGAGGCACATTTAAATGTTCTATCAACTGTTAAAGAAAGCCACATTGAAGCCAAAGAGTCCTTGGTATATAGCTACACAAAGAGTTTTAATGCATTTGCTGCTAAACTTTCTGAGGATGAAGCCAAAAAGTTATCCGCCAAGGATGAAGTGCTTTCATTGTTTCCAAATCGGTACCACAAGCTACACACAACAAGATCATGGGACTTCATTGGATTACCTTTGACTGCTAAGAGAAAATTGCAGTCAGAGAGTGACACCATTGTAGGGCTTTTGGACACAGGGGTTACTCCAGAGTTTCAAAGCTTCAAGGACAATGGACTTGGTCCTCCTCCAGCTAAATGGAAAGGAACTTGTGATCACTTTACTAATTTCTCAGGCTGCAATAACAAGCTTATAGGAGCAAGATACTTCAAGCTTGATAAAATGGAAGATCCAGAAGATATATTGTCTCCCATAGATGTTAATGGGCATGGAACTCACACTTCTTCAACAGCAGCAGGAAGTCTTGTCCCTAAAGCAAGTCTCTTGGGCTTGGCCGAAGGCACTGCTCGCGGCGCAGTTCCATCGGCCAGGCTGGCCATTTACAAGGTCTGCTGGCAGAGCAGTGGATGTGCTGACATGGACTTGTTAGCTGCATTTGAAGCAGCTATCCATGATGGTGTGGATGTCATATCAATTTCAATAGGTGGAGGGGACACAAATTATTTGAAGGATTCCATTGCAATTGGAGCATTTCATGCCATGAGGAATGGCATAATAACTGTGGCCTCGGCCGGAAATGATGGCCCGGCTATGGGGACTGTCACGAATACTGCGCCGTGGATTGTGACAGTTGCAGCTAGTGGCATTGATAGGGAGTTCAAAAGTACTATAGAGTTGGGGAATGGAAAGAATGTTTCTGGGGCAGGAGTAACCACTTTTAGTCCAAAACAAAAAGAGTACCCTCTAATCAATGGGGTAGATGCAGCCAAAAACTCTGATAGCAAGGACAGTGCTAGCTTCTGTTTTGAAGACTCTTTAGACCCAAAAAAAGTGAAAGGAAAGATTGTATACTGCAAACAAGGAACTGGTGGAACTGAAGGTGTTATCAAAGGGTATGGAGGAATTGGAACTATACTTGAAAATGAACAATTCCCTGAAGTTGCCCAAATTTTCATGGCTCCTGCTACCATTGTTAATACTACCATAGGTCAAAGTATTACCACTTATATAAAGTCAACAAGATCACCATCAGCAGTGATACTTAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTACTGCTTCATTTTCATCAAGGGGTCCAAATCCAGGTTCCAAAAACATTCTCAAGCCTGATATAGCAGCACCTGGAGTTAACATATTGGCATCTTATACACTAAGGAAATCAATAACTGGTTTGAAAGGAGATACTCAATTCTCAGAATTCACTCTAATGTCAGGAACTTCCATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTCAAGTCTTTTCACCCAGATTGGACTCCTGCTGCTATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGCAAGAGAGTAGACAAGGAAGCCGAATTCGCCTTTGGCGCTGGTCAAATAAACCCAACGAAAGCCGTGAATCCTGGTCTAGTCTATGACATGGATGACCTTGGTTACATCCAATTCCTGTGCCATGAGGGCTACAATGGTTCCAATTTATCAGTACTAGTAGGACACTCTATAAATTGCACCTCTTTGGTACCAGGACATGGCCATGATGCTATCAACTACCCTACAATACAATTCAATGTGAAAAAAGACAAAGAAACAACCCTTGGTGTGTTTAGGAGAAGAGTTACCAATGTTGGTCCTGTTCCAACAAGTTTCAATGCTACCATTACAGCTCCTAAGGGAGTGGAAATTACAGTTAAGCCAAGTAGCCTTGTTTTCTCAAAGGCTATGCAACAAAGGAGCTTCAAGGTTGTGGTGAAAGCAAAAACAATGGCAAGCATGAAAGTTGTGTCTGGCTCTCTTGTTTGGAGAAGTCCACGTTACATTGTTAGGAGCCCTATTGTAATCTATAGTCCTTAA 2289 0.4395 MPPHRHCPPLLLLLPAAAPLSAASSSSSYRRSHRQTAARRLPLLLLAATPLPNFYIVFLGDHPLIRDNAHEAHLNVLSTVKESHIEAKESLVYSYTKSFNAFAAKLSEDEAKKLSAKDEVLSLFPNRYHKLHTTRSWDFIGLPLTAKRKLQSESDTIVGLLDTGVTPEFQSFKDNGLGPPPAKWKGTCDHFTNFSGCNNKLIGARYFKLDKMEDPEDILSPIDVNGHGTHTSSTAAGSLVPKASLLGLAEGTARGAVPSARLAIYKVCWQSSGCADMDLLAAFEAAIHDGVDVISISIGGGDTNYLKDSIAIGAFHAMRNGIITVASAGNDGPAMGTVTNTAPWIVTVAASGIDREFKSTIELGNGKNVSGAGVTTFSPKQKEYPLINGVDAAKNSDSKDSASFCFEDSLDPKKVKGKIVYCKQGTGGTEGVIKGYGGIGTILENEQFPEVAQIFMAPATIVNTTIGQSITTYIKSTRSPSAVILKSHEVKRPAPFTASFSSRGPNPGSKNILKPDIAAPGVNILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVDKEAEFAFGAGQINPTKAVNPGLVYDMDDLGYIQFLCHEGYNGSNLSVLVGHSINCTSLVPGHGHDAINYPTIQFNVKKDKETTLGVFRRRVTNVGPVPTSFNATITAPKGVEITVKPSSLVFSKAMQQRSFKVVVKAKTMASMKVVSGSLVWRSPRYIVRSPIVIYSP* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2460 762 CDD Peptidases_S8_3 129 586 IPR034197 -
Ahy12g2460 762 Pfam Peptidase inhibitor I9 55 132 IPR010259 -
Ahy12g2460 762 Gene3D Peptidase S8/S53 domain 155 622 IPR036852 GO:0004252|GO:0006508
Ahy12g2460 762 Pfam Subtilase family 154 604 IPR000209 GO:0006508|GO:0008236
Ahy12g2460 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 48 132 IPR037045 -
Ahy12g2460 762 SUPERFAMILY Subtilisin-like 152 616 IPR036852 GO:0004252|GO:0006508
Ahy12g2460 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 760 IPR045051 -
Ahy12g2460 762 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 54 760 - -
Ahy12g2460 762 Gene3D - 629 761 - -
Ahy12g2460 762 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Ahy12g2460 762 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Ahy12g2460 762 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Ahy12g2460 762 Pfam Fibronectin type-III domain 661 759 IPR041469 -
Ahy12g2460 762 ProSiteProfiles Serine proteases, subtilase domain profile. 136 612 - -
Ahy12g2460 762 Gene3D - 354 490 - -
Ahy12g2460 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Ahy12g2460 762 CDD PA_subtilisin_like 360 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2460 Ahy-Chr12 113303912 113313101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2460 53 600 Subtilisin-like Serine Gene Family AT4G00230 65.693 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2460 - - ccaj:109800351 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2460 12 113303912 113313101 Ahy2g2127 2 96747656 96752115 hybridization
Ahy12g2460 12 113303912 113313101 Ahy14g2297 14 124353738 124360794 PCT
Ahy12g2460 12 113303912 113313101 Ahy4g2020 4 113027620 113034407 PCT