Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2451 ATGGCAGCACCTTCACCTTCACCTTCTCCTTCTTCTCCTTCAATATGCCCCATCGACTTCAGCTATGTTAAGAGAGTTCCATGGAACCCTTCAGCATGTGAGAATTTCCACTCTTTATCATCAAACTTGAGCAACTGTTGCACCTCGCTCTTATCTCTAATCGGAATAGGGTTCGCGCAGTACCTTAAAGCAACTACAAATTTCAACCTCCCAAACCTTGAAACCTCAACCTCATGCGTCCATGATTTCCAGTCTCAGCTCAATTTCTTGTCTCTCCAAAACAACCTCGTTGACTTGAGCTTTGACCCTCACCAGTTCATCATGTCCCGAAATGTCTGCACAGGAATTGAAACCTTAAAAGATTGGGACAAGAAGCTTGGTCAAATCACGCCTCTTGATACTAGTTGCAAACAAGACCTCACTGATCTTTCGCTATGTGATGTGTGTCTTACTGCGGGGTTTCAGGTGCAGCATAAACTTGTCTCTATTGATGGTAATGCTTTTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGTTAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGGTGGTTCTGGTGAAAAAATTCACCAGGGTTTGGTTTTTGGGTTAACTAGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGAATTTGATTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATATGGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCCACTGATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTACAAGGGGGTTTTGTCCGATGGTTCAGTCGTTGCAGTTAAGAGGATCTTGGAATCTGATTTTCAAGGGGATATGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTAAAGTACCGGAATCTGGTGCCTCTTTGA 1053 0.4255 MAAPSPSPSPSSPSICPIDFSYVKRVPWNPSACENFHSLSSNLSNCCTSLLSLIGIGFAQYLKATTNFNLPNLETSTSCVHDFQSQLNFLSLQNNLVDLSFDPHQFIMSRNVCTGIETLKDWDKKLGQITPLDTSCKQDLTDLSLCDVCLTAGFQVQHKLVSIDGNAFHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYPQGGGSGEKIHQGLVFGLTSAGVALLVMSCLLGVYVWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNMGSIWFKIDELEKATDNFSTKNFIGRGGFGLVYKGVLSDGSVVAVKRILESDFQGDMEFCNEVEIISNLKYRNLVPL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2451 350 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Ahy12g2451 350 ProSiteProfiles Protein kinase domain profile. 291 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2451 350 SUPERFAMILY Protein kinase-like (PK-like) 270 350 IPR011009 -
Ahy12g2451 350 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 350 - -
Ahy12g2451 350 Pfam SPARK 11 174 IPR043891 -
Ahy12g2451 350 Gene3D Phosphorylase Kinase; domain 1 262 350 - -
Ahy12g2451 350 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2451 Ahy-Chr12 113133060 113134296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2451 12 350 Receptor kinase-like Gene Family AT1G11050 51.471 9.98e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Ahy12g2451 SPARK 1.10E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2451 - - ahf:114924878 684.1