LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy12g2435	ATGCCCTCCCGTCCACCACCACTGCCACAACAACAACAACCACTCTCCACGGCGGCGCCACCCCTCCAACACAACCACCACCACCACAACCAAAGAATCATTCTCATCGGATCCCTCTCCCTCACCATCCTCCTCCTCCTCTCTCTCCTCTTCACCCTCCTCACCTTCCTCTACCGGAAACTCTCCCTCCACCGCACCACCCCCTTTCCCCACCACCACCACCACCACAACAACCACCGCCGCTACTCCTACACGCTCCTCCGCCGCGCGACAAACTCCTTCTCCCCGTCCACCAAACTCGGCCACGGCGGCTTCGGCTCCGTCCACAGAGCCACCCTCCCTTCCGGCGAAACCGTGGCACTGAAGCTCATGGACTCGCCGGGCTCCCTCCAAGGCGAACGCGAGTTCCACAACGAACTCTCTCTCTGTTCGAATCTCAACTCACCTTTCATTCTCTCTCTCTTGGGTTTCTCTTCCGACAGAAGAAACCGCAAACTCATACTCGTCTATGAGCTAATGAAGAATCGAAGCCTCCAAGACGCGCTTTTGGATCGCAAGTGTCCCGAGCTTATGAACTGGAAAACCCGATTCGACGTTGTAGTTTCGGTGGCCAAAGGGTTGGAGTACTTACACCATTGTTGTGACCCTCCGGTGATTCACGGTGACATCAAGCCGAGTAATATTTTGCTGGATTCTGAGTTTAGGGCTAAAATTGGGGATTTTGGGCTTGCCAGGGTGAAGGAGGAGGTTGGGGTTGTGGTGGTGGAGGAGGAAGTTCACGGTGGTGATTGTGGTGGGGGCGGCGGTGGTGATGAAGAGTGCGATCGTGGTTCGGTGGTGGAGAGTGTGGCGACTGGGACTACTGCTGGATTTGATTTGGAGAGGTCGCCGGAGAGTTTTGCGGCGGGGAGGGTTTTGGATTCAGATGCGTCTCCGGCGGCGGCGGGGACTTCGCCGGAGGTGGGGTTGGAGAAAGGTAGCGTCTTGTCGGATGGGTTGTTTGATGGGGTGAGTGTGGAGAGTGGGAATCAGAGGAGGAAGGGTGGCGGTAATGGCGGTGGTTCCGGCAGGGATTGGTGGTGGAAACAGGACAATGGTGGAGGGTCAGAGTCAGGGAGGGTTAAGGATTATGTTATGGAATGGATTGGTAGTGAGATAAAGAAAGAAAGGCCCAAGAATGAATGGGTTGCTTCTCCAAGTAGCACAGGTTGTGATGCAGAGAATAATGGTGGTGTTGAAGGATTGGATTCGGAGGCCAAAAACAAGAATAAGAACAAGAAGAAAAAGCAGAGAAAGAGGTTGGATTGGTGGGCTTCATTGGATGAGGAGAAGGTGAAGAATCAGCCGCAGCAGAAGAAGGAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGTGAGGAGCTGGCGAAGAAGAGCAAGAAGAAGAAGAGGAGCCTTGATAACAATGGTGGTGAAGCTTGGTGGCAGAACAAAGATGAGGACTTGGTGGTGGTTCAGGATCAGAAGAGGAAGAGGAAAAACAAGACCAGCAGAGGGAGCATTGATTGGTGGCTTGATGGTTTGAGTGGTGAACTAATCCGAAACAACAATGGCAGAAGGAATAGCCAAGATTGGGTGAGTGGTGACATACCGAAGAGTGGTGGAATCAGCAGCACTCCAAGCATGAGGGGGACTGTGTGTTATATTGCTCCTGAATATGGTGGTGGTGGCCAATTATCTGAGAAATGTGATGTATATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGGAGGAGACCCCTTCAAGTGACAGCATCGCCGATCTCGGAATTCGAGAGGGCTAATTTGATTTCATGGGCTAGGCAACTTGCTCACAATGGCAGGCTATTGGATCTTGTTGACACTAACATTCTTTCATTGGACAAGGAACAAGCTTTGCTCTGCATCACAATTGCCTTGTTGTGCCTCCAGAGATCGCCTGCGAAGAGGCCGTCCATGAAGGAGATTGTGGGGATGCTCTCCGGCGAGGCTGACACGCCTCACTTGCCATTCGAGTTCTCGCCGTCGCCGCCCTCAAATTTTCTCTTCAAGTCCAGGAAGAAGGCTCGGTGA	2103	0.5283	MPSRPPPLPQQQQPLSTAAPPLQHNHHHHNQRIILIGSLSLTILLLLSLLFTLLTFLYRKLSLHRTTPFPHHHHHHNNHRRYSYTLLRRATNSFSPSTKLGHGGFGSVHRATLPSGETVALKLMDSPGSLQGEREFHNELSLCSNLNSPFILSLLGFSSDRRNRKLILVYELMKNRSLQDALLDRKCPELMNWKTRFDVVVSVAKGLEYLHHCCDPPVIHGDIKPSNILLDSEFRAKIGDFGLARVKEEVGVVVVEEEVHGGDCGGGGGGDEECDRGSVVESVATGTTAGFDLERSPESFAAGRVLDSDASPAAAGTSPEVGLEKGSVLSDGLFDGVSVESGNQRRKGGGNGGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKNEWVASPSSTGCDAENNGGVEGLDSEAKNKNKNKKKKQRKRLDWWASLDEEKVKNQPQQKKEKNRKPREWWKEEFCEELAKKSKKKKRSLDNNGGEAWWQNKDEDLVVVQDQKRKRKNKTSRGSIDWWLDGLSGELIRNNNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTNILSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLSGEADTPHLPFEFSPSPPSNFLFKSRKKAR*	701

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy12g2435	700	Pfam	Protein kinase domain	555	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy12g2435	700	Pfam	Protein kinase domain	97	246	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy12g2435	700	ProSiteProfiles	Protein kinase domain profile.	94	681	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy12g2435	700	Coils	Coil	412	432	-	-
	Ahy12g2435	700	SMART	serkin_6	94	670	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy12g2435	700	Gene3D	Transferase(Phosphotransferase) domain 1	532	678	-	-
	Ahy12g2435	700	Gene3D	Transferase(Phosphotransferase) domain 1	173	289	-	-
	Ahy12g2435	700	PANTHER	OS07G0586332 PROTEIN	1	700	-	-
	Ahy12g2435	700	Gene3D	Phosphorylase Kinase; domain 1	67	172	-	-
	Ahy12g2435	700	MobiDBLite	consensus disorder prediction	388	433	-	-
	Ahy12g2435	700	MobiDBLite	consensus disorder prediction	680	700	-	-
	Ahy12g2435	700	SUPERFAMILY	Protein kinase-like (PK-like)	69	688	IPR011009	-
	Ahy12g2435	700	MobiDBLite	consensus disorder prediction	334	372	-	-
	Ahy12g2435	700	PANTHER	OS07G0586332 PROTEIN	1	700	IPR044576	-
	Ahy12g2435	700	MobiDBLite	consensus disorder prediction	1	24	-	-
	Ahy12g2435	700	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	218	230	IPR008271	GO:0004672\|GO:0006468
	Ahy12g2435	700	ProSitePatterns	Protein kinases ATP-binding region signature.	100	122	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy12g2435	Ahy-Chr12	112771168	112774124	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy12g2435	528	670	Receptor kinase-like Gene Family	AT3G58690	34.228	1.36e-13	71.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Ahy12g2435		Pkinase	2.10E-27	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy12g2435	-		-	aip:107626015	1237.63