Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2421 ATGATGGAATTCCAGGGGCTGAGGCAAAGGATGATGACAGAGTACAAGGAGACTGTTGAAAGAAGGTACTTCACGGTGACCGGTGAGTACCCGGACGAAGAAGTGATCGAGAAGATCATTTCGAATGGCGAGGAAGAGGAGTTCTTGGGGAAGGCGATTGGGGAGCATGGGATGGGAAAAGTGATGGAAACCGTGGTTGAGATTCAGGACAGGCACGATGCGGCGAAAGAGATCGAGAAGAGCTTGCTTGAGTTGCATCAGGTGGAACCCTCCGACAAACCCTTCGGAGAAACGCGTCGGAACCCTCCGCCACACCTTCAAGGATCTCCGGTGCCGATCGCTGCTGCCACTCCGTCAACCCAGGGCGTCGCAAGCATCTGCTCCCCCTTCACAGAGGTGCCGTCCTTGGCGCCGATACTTGTTGTCAGATCTGCCGCTGCTTCGTCCTAG 450 0.5556 MMEFQGLRQRMMTEYKETVERRYFTVTGEYPDEEVIEKIISNGEEEEFLGKAIGEHGMGKVMETVVEIQDRHDAAKEIEKSLLELHQVEPSDKPFGETRRNPPPHLQGSPVPIAAATPSTQGVASICSPFTEVPSLAPILVVRSAAASS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2421 149 Gene3D - 1 88 - -
Ahy12g2421 149 MobiDBLite consensus disorder prediction 85 115 - -
Ahy12g2421 149 MobiDBLite consensus disorder prediction 85 99 - -
Ahy12g2421 149 SUPERFAMILY t-snare proteins 1 88 IPR010989 GO:0016020|GO:0016192
Ahy12g2421 149 Pfam Syntaxin 1 88 IPR006011 GO:0016020
Ahy12g2421 149 PANTHER SYNTAXIN-RELATED PROTEIN KNOLLE 1 88 - -
Ahy12g2421 149 PANTHER SYNTAXIN 1 88 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2421 Ahy-Chr12 112627529 112628669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2421 1 88 SNARE and Associated Proteins AT1G08560 79.775 2.31e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2421 K08486 - aip:107627854 297.745