Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2398 ATGGAAGCCAAGTCTCTTGAAGCTGTTCCCCCTTCACACAACACTTCTGGTGGACCCCAGAAGAAGATTGACATGGGACAAAAGATGGATGGTGGTGGTGGTGTTGGAGTGATCAAAGAAGAGAAGAAGAACACAACAAGTTTTGAAACACTGAAGAGAGCAGAAGAGGAAGAAGGAGGAGCAATAAGAAAACCTGCTATGAACAAAGCATGGCAACAACAAGAAGATAGGTGCTGTTGTTTATTGTTCACAGAAGCTCAAAGGCGTGAGCTTCATCATCAAGTTCTTACCTTCAACTACTTTGCTTATAATCTCCCTCTTCCTCTTCCTCTTCCTCTCCCTCACCCTCATCATCACCTTGTGCTACCCTTTGGTTCTGGCTTTGGTGTTTTTCATAAGCAATTTCCAAGCTATATGTCAGGAGAATACAATCACTACCAATGTTTTGACTATGGAAGTATGATGGATCCTGAACCGAATAGGTGTAGAAGAACCGATGGAAAGAAATGGAGGTGCAGCAAGAACACAGTACCTTATCATAAGTATTGTGAACGACACGTGCACAGAGGCCGGAACCGTTCAAGAAAGCCTGTGGAAACATCCAAAGTTGTTAACTCAAATTCGATAACAAAGCCTTGTAGCAAGCTACATACTGCTATAGCCTCAAACACAAAATCTGCTGTTTCAATTCCAACACCTAAGGTAACAAACTTTGGCAACAGGACATCGGTTGCTTCGGATAACAGAAGTAGCCGAGATTTATGCAAGAAGGATAACCAGATCAAGAACTGTGTCGGCTACAGTATCAGTGTTATGAGTAGTGGTAAAGGAAGTGTTACCAATGATAGTAATTGCATCTCTGCCGGCATAGGCTTCTCCCCAAGGAGTGTTCTCCAAGTTTCTGGTTGCAATAGTTCACACCACAACTTCACAAACAGTACAGAGCTTGAACCAGGCAGGTGCCGGAGAACAGACGGCAAGAAGTGGCGGTGCAAGAGTGCTGTTCTTCCTGGTCAGAAGTATTGCACCACTCACGTGCACAGAGGAGCTAAAAGGCGTTGTTCCACAGATCATGAGCCAGTCACTACTCCTACTCCTACTCCTCGCTATGCCAATACCAATTCTCGGCCGATTTACTCTGCCGCGAACAGGACAACGATAACCGAAGCTCGGAAAACAGTTTGCACAGTTCCTAACACAAAACTTTCTATGTCAATCCCAGCAAGTGCACCATTGAGACACAACAATGGGAAGAGTCCTAATAGGAGCAGTGACACAGACACCACCATCACTGACACCATCAATGAGTGTAGCTATGCTTCTTTCTAA 1329 0.447 MEAKSLEAVPPSHNTSGGPQKKIDMGQKMDGGGGVGVIKEEKKNTTSFETLKRAEEEEGGAIRKPAMNKAWQQQEDRCCCLLFTEAQRRELHHQVLTFNYFAYNLPLPLPLPLPHPHHHLVLPFGSGFGVFHKQFPSYMSGEYNHYQCFDYGSMMDPEPNRCRRTDGKKWRCSKNTVPYHKYCERHVHRGRNRSRKPVETSKVVNSNSITKPCSKLHTAIASNTKSAVSIPTPKVTNFGNRTSVASDNRSSRDLCKKDNQIKNCVGYSISVMSSGKGSVTNDSNCISAGIGFSPRSVLQVSGCNSSHHNFTNSTELEPGRCRRTDGKKWRCKSAVLPGQKYCTTHVHRGAKRRCSTDHEPVTTPTPTPRYANTNSRPIYSAANRTTITEARKTVCTVPNTKLSMSIPASAPLRHNNGKSPNRSSDTDTTITDTINECSYASF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2398 442 ProSiteProfiles WRC domain profile. 315 360 IPR014977 -
Ahy12g2398 442 MobiDBLite consensus disorder prediction 353 375 - -
Ahy12g2398 442 ProSiteProfiles WRC domain profile. 156 200 IPR014977 -
Ahy12g2398 442 MobiDBLite consensus disorder prediction 359 375 - -
Ahy12g2398 442 MobiDBLite consensus disorder prediction 405 430 - -
Ahy12g2398 442 Pfam WRC 157 199 IPR014977 -
Ahy12g2398 442 Pfam WRC 317 353 IPR014977 -
Ahy12g2398 442 PANTHER - 51 236 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy12g2398 442 PANTHER - 302 421 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy12g2398 442 MobiDBLite consensus disorder prediction 1 44 - -
Ahy12g2398 442 ProSiteProfiles QLQ domain profile. 82 117 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy12g2398 442 PANTHER GROWTH-REGULATING FACTOR 9 302 421 - -
Ahy12g2398 442 PANTHER GROWTH-REGULATING FACTOR 9 51 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2398 Ahy-Chr12 112204291 112207283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2398 86 357 GRF Transcription Factor Family AT2G45480 31.845 4.69e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2398 - - ahf:112753949 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2398 12 112204291 112207283 Ahy12g2398 12 112204291 112207283 ECH