Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2387 ATGGATTGTGATGAAAATAATCAACAAAGAGGTGGGCCTTGTGGAGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGAAGGGATGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTTCACACTTTGCTGCGGTGCATAAGGTTTTTGGTGCAAGCAATGCATCTAAGCTTCTCATGAGGATCCCTCCTCATAAGAGGCTTGATGCTGTTCTCACTCTTTCTTATGAGGCTCTTTCTAGGGTTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTGAACTTGCAAGCAGAATTAACATATGTTCAGGCCCGTCTTGCTACAATGCATCGCATCCCTATAGCTGCTGCTGCTGCTTCACCACCAACTCTTCATTCATCATCATCCTTAGATCACTTGGCATCATCAAATGCTGACTTGCAAAATGCCTCTAACAACATGTCCATGAACTTTGATCCTCCTCCTCAACCACCACCACACTCAACAACATTAGAATCAAGCAGCTTCATCAACTCATCAGATGAACCACCACCACCACTACTACTCGAGGATGGGGATCTTCAAACTTTGGCAAGAGAATTTGTCTCTAGGTACTTGCCCGGAGTAAGATTCCAGCCATCTAATAATTCTCACTAA 660 0.4379 MDCDENNQQRGGPCGACKFLRRKCVKGCIFAPYFDSDQGTSHFAAVHKVFGASNASKLLMRIPPHKRLDAVLTLSYEALSRVRDPVYGCVAHIFALQQQVVNLQAELTYVQARLATMHRIPIAAAAASPPTLHSSSSLDHLASSNADLQNASNNMSMNFDPPPQPPPHSTTLESSSFINSSDEPPPPLLLEDGDLQTLAREFVSRYLPGVRFQPSNNSH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2387 219 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
Ahy12g2387 219 MobiDBLite consensus disorder prediction 150 194 - -
Ahy12g2387 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 7 209 - -
Ahy12g2387 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 209 - -
Ahy12g2387 219 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2387 Ahy-Chr12 111973469 111979586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2387 11 216 AS2 family AT4G00210 52.995 3.93e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy12g2387 LOB 5.70E-36 No_clan