Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2385 ATGGAAGCTAGAGAAGGCATTAGTTCCGGGGTTACGGTGATAGGGGCAGAAGCTCCATCAGCATATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTGCCTGAGGGAGGCACGGCAGCTGTGGCTGCGGCTGCGGCTGCTGCTGCCGCAGCCGGGGTTTCTCCGGTGAGTGTGGGGATAGATGGATCGACGGTTAAGAAGAAACGGGGTAGACCGAGGAAATATGGGCCGGATGGATCTGTCACTATGGCATTGTCACCATTGCCACTCTCATCTTCAGGTCCACATTCAAATGACTTTTCATCCGGTAAACGGGGGAAATCGAAGGGGGCGGAGTACAAGCAGTCGAAAAAACTTGGGTTTGATCAACTAGGTGAATATAATGCATGTGCTGATGGTACAAACTTTCTGCCACATATCATCACTGTTAATGCTGGAGAGGACATTACCATGAAGGTTATATCGTTTTCTCAGCAAGGACCGCGAGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCGAATGTCACTCTTCGTCAACCTGATTCTTCTGGCGGCACTTTGACCTATGAGGGCCGTTTCGATATACTTTCTTTGTCGGGATCGTTCATGCCTACTGACAACCAAGGAACACGAAGCAGGACGGGTGGAATGAGTGTCTCGTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGTGGTGTTGCCGGACTTCTAGTAGCCGCTAGTCCGGTGCAGGTGGTGGTGGGAAGTTTCCTGCCAAGCAACCAACAAGATCAGAAACCAAAGAAGCTGAAGCCAACCGATTATTCCACGCCCGTTGTTACTCCGGCAGTCATCTCGATGTCTTCCGCACCAAGTCACCCGAGCAATACTGAGAAAGATGATCATGTGATGGGTGGTGCACACCATGTGATGCAAAACTCATCATCAAACCTTACCCCTTCTCCCTTCAGAAGAGAAAATTGGGTGAACATGCACTCCATGCAACAAGACTCAAGAAAGTCGGCTACCGACATCAACATATCTTTGCCAGATAGTTAA 1050 0.4971 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPEGGTAAVAAAAAAAAAAGVSPVSVGIDGSTVKKKRGRPRKYGPDGSVTMALSPLPLSSSGPHSNDFSSGKRGKSKGAEYKQSKKLGFDQLGEYNACADGTNFLPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFDILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKLKPTDYSTPVVTPAVISMSSAPSHPSNTEKDDHVMGGAHHVMQNSSSNLTPSPFRRENWVNMHSMQQDSRKSATDINISLPDS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2385 349 MobiDBLite consensus disorder prediction 88 104 - -
Ahy12g2385 349 Gene3D - 141 270 - -
Ahy12g2385 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 348 IPR039605 GO:0003680
Ahy12g2385 349 MobiDBLite consensus disorder prediction 63 115 - -
Ahy12g2385 349 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 257 - -
Ahy12g2385 349 ProSiteProfiles PPC domain profile profile. 136 278 IPR005175 -
Ahy12g2385 349 MobiDBLite consensus disorder prediction 329 349 - -
Ahy12g2385 349 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 348 - -
Ahy12g2385 349 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Ahy12g2385 349 CDD DUF296 141 231 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2385 Ahy-Chr12 111912764 111917492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2385 10 346 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.909 1.31e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2385 - - gmx:100793726 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2385 12 111912764 111917492 Ahy2g2060 2 95792580 95797352 hybridization
Ahy14g2227 14 122093919 122097629 Ahy12g2385 12 111912764 111917492 PCT
Ahy4g1962 4 111705868 111709667 Ahy12g2385 12 111912764 111917492 PCT
Ahy12g2385 12 111912764 111917492 Ahy14g2227 14 122093919 122097629 PCT
Ahy12g2385 12 111912764 111917492 Ahy4g1962 4 111705868 111709667 PCT