Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2346 ATGAGGCATACCTTTGTTGCCACTTTGTTTCTATTAGTCCTCCTAACTGTTATGAGTGCCAACACCATGGTGGCAGCATCGAATTCCTCGTCCTTGAACGCGGAACAAAAGGCCTTGCTCCATATCGGGTGGACGGAAGGTCGCAACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGAAGCTGCAAGTGTCATAGAGATTTCAACAAGGCGTTATTTTGTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTGAGTGGCATGAGACTCAAGGGAATTATTCCTACTGAAATAAGCACTCTTACAAAGCTTATGTACCTTGATCTTTCCTGTAACTATCTTGAAAGTGGGTTACCTACCTCAATCTCAAATCTCACTCAACTTATAACACTTAATGTTTCTAACAACTTTCTCAGTGGTGGTATTCCATCTACTTTTGGGCACCTCAAGTATTTGGTTGAACTCTCCCTAGACTCGAACCAACTTCAACATCCCATTCCTAAAGACTTGGGGAACTTGAAGCATTTAGAGCATTTGTCTCTTTCAAATAACTCATTCAATTGTTCAATCCCTCCCTCTATGGGGCAATTGGATAAATTGAAATTTCTCTCCCTTGGTTCGAACCATATCGAAGGTCCCATCCCCATAGAACTAGAGCACTTGGTCAATCTGGAAGTTTTAGACCTTTCTCACAACAAGATTTCTGGTGTTATACCATCTTGGATTGGACAACTCTCTAGACTTTCAATACTAGATGTTTCCAACAATAGACTTGAGGGACCAATTCCATTTGGTATTCTAAACCATTGCAATTATGTGCAACTAAGTAATAATTCTATAAGTGGATCCCTTCCTTCTCAAATGGGCAATCTTTCTTATCTTGACCTTAGTTACAATAACCTCTCCGGAAACATACCTGTGGGAATCTATTCTGTATCCTACCTCAACATCTCTTACAATTCCTTTGATTTGGATCACCAACTTTGTGATCTTCTGAAAGACTCATTGATTGGTAATAATCCCCCTTGCTATTCTGCAACTCATGATCACTCAAGTCCTATTCTCGCAGTAATCATAGTGTGCATCTTATATGGCATATGCATTTCAATAGTATTTGTATGCCTAGATTTCTGGTGTCCATTCCAAAATGAGTCCAAAGATGATAATCAAAGGAACAATGGAGATTTCGTTTCAATTAGGAACTATGATGGTAAAATTGCATTTAAAGACATAATTAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGCTTCCTAGTGGCAGAAATGTTGCACTAAAGAAGCTTCACAATACAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATCCGCCACCGCAACATCATTAGGCTTTATGGTTTCTGTTTGCACAACGGCTGTATGTTTTTGGTGTATGAGTATATGGAAAAGGGAAGCTTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGCTGAACTGGACTTGTCTATCAGATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCTGGATACATTGCTCCAGAGATGGCTTATAACATCAATGTGACAACAAAATGTGATGTTTATGGTTTTGGTGTGGTGACTTTGGAAACAATAATGGGCGAACACCCTAAGGAACTAATTTCCAATGTGTCAAAACCATCTGCTCCAAAGATCATGCTCAAAGATATACTGGATTCACGTATTCGATTGCCTTTTCTTCGAAAAGACATGCAGGATATTGTACTTGTTGTAACATTAGCACTAGCATGCTTACATCCCAACCCAACATCAAGACCTTCAATGCAGGACATAGCTAATGAGCTTTTGTTTTCAAACTCGCCATTGCTTTGGCATTTTGATGGCATTTCAATCCACCAACTTGTGAATCAAGAAATATATGCAATAGGTAAAACTTAG 2064 0.3895 MRHTFVATLFLLVLLTVMSANTMVAASNSSSLNAEQKALLHIGWTEGRNISKHCNWTGIVCNEAASVIEISTRRYFVIPPSELRNFNFTAFPNLIRLELSGMRLKGIIPTEISTLTKLMYLDLSCNYLESGLPTSISNLTQLITLNVSNNFLSGGIPSTFGHLKYLVELSLDSNQLQHPIPKDLGNLKHLEHLSLSNNSFNCSIPPSMGQLDKLKFLSLGSNHIEGPIPIELEHLVNLEVLDLSHNKISGVIPSWIGQLSRLSILDVSNNRLEGPIPFGILNHCNYVQLSNNSISGSLPSQMGNLSYLDLSYNNLSGNIPVGIYSVSYLNISYNSFDLDHQLCDLLKDSLIGNNPPCYSATHDHSSPILAVIIVCILYGICISIVFVCLDFWCPFQNESKDDNQRNNGDFVSIRNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRNVALKKLHNTESENPSFYKSFSNEVKVLTEIRHRNIIRLYGFCLHNGCMFLVYEYMEKGSLFYNLAIDEEAQELNWTCLSDFGTAKLLSSDSSNQTLLAGTPGYIAPEMAYNINVTTKCDVYGFGVVTLETIMGEHPKELISNVSKPSAPKIMLKDILDSRIRLPFLRKDMQDIVLVVTLALACLHPNPTSRPSMQDIANELLFSNSPLLWHFDGISIHQLVNQEIYAIGKT* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2346 687 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 226 532 - -
Ahy12g2346 687 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 533 676 - -
Ahy12g2346 687 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 278 - -
Ahy12g2346 687 PRINTS Leucine-rich repeat signature 238 251 - -
Ahy12g2346 687 PRINTS Leucine-rich repeat signature 259 272 - -
Ahy12g2346 687 Gene3D Ribonuclease Inhibitor 280 355 IPR032675 -
Ahy12g2346 687 ProSiteProfiles Protein kinase domain profile. 432 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2346 687 Gene3D Transferase(Phosphotransferase) domain 1 509 662 - -
Ahy12g2346 687 Pfam Protein kinase domain 437 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2346 687 SUPERFAMILY L domain-like 53 335 - -
Ahy12g2346 687 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 226 532 - -
Ahy12g2346 687 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Ahy12g2346 687 Gene3D Ribonuclease Inhibitor 181 279 IPR032675 -
Ahy12g2346 687 SMART LRR_typ_2 115 138 IPR003591 -
Ahy12g2346 687 SMART LRR_typ_2 235 258 IPR003591 -
Ahy12g2346 687 SMART LRR_typ_2 139 162 IPR003591 -
Ahy12g2346 687 SMART LRR_typ_2 187 211 IPR003591 -
Ahy12g2346 687 SMART LRR_typ_2 259 283 IPR003591 -
Ahy12g2346 687 SMART LRR_typ_2 302 326 IPR003591 -
Ahy12g2346 687 Pfam Protein tyrosine and serine/threonine kinase 533 657 IPR001245 GO:0004672|GO:0006468
Ahy12g2346 687 Pfam Leucine rich repeat 233 272 IPR001611 GO:0005515
Ahy12g2346 687 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Ahy12g2346 687 Gene3D Phosphorylase Kinase; domain 1 395 508 - -
Ahy12g2346 687 Pfam Leucine Rich Repeat 189 207 IPR001611 GO:0005515
Ahy12g2346 687 ProSitePatterns Protein kinases ATP-binding region signature. 438 460 IPR017441 GO:0005524
Ahy12g2346 687 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 533 676 - -
Ahy12g2346 687 SMART LRR_sd22_2 163 189 - -
Ahy12g2346 687 SMART LRR_sd22_2 115 141 - -
Ahy12g2346 687 SMART LRR_sd22_2 211 234 - -
Ahy12g2346 687 SMART LRR_sd22_2 259 274 - -
Ahy12g2346 687 SMART LRR_sd22_2 235 253 - -
Ahy12g2346 687 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 22 278 - -
Ahy12g2346 687 ProSiteProfiles Leucine-rich repeat profile. 237 259 IPR001611 GO:0005515
Ahy12g2346 687 SUPERFAMILY Protein kinase-like (PK-like) 418 659 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2346 Ahy-Chr12 111125947 111128221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2346 94 567 Receptor kinase-like Gene Family AT4G08850 33.585 9.38e-80 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2346 PK_Tyr_Ser-Thr 6.60E-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2346 - - ahf:112730550 1364.36