Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2345 ATGCTCACTGCTAGTGCCTGTTCATCGTGTTTTTTTATTGTCTGTTCAGAAACCAAACCCTCTTCATGCTTGTTCCCCGATGTTGGCATCGCCACTACTGCTGGAACTCACAAATTGTCAGCCTTAGATGAAGAAGCCAATGCTATGCATTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCGACGAGTTCAGGACACAACTCTGCTCTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCTAAACTAAGTGGTCTTAAGAAGCTACAACATCTCAACCTATCATACAACTATTTTGAAGGTGAGCTTCCTTTTACATTATTGGACAATCTAACTCAACTTGTGGTGTTGGACATTTCTAACAATTATATTAGTGGTACAATTCCACAAGAACTAAGCAAGCTGGAGAGACTTGTCATGTTGGACTTGAGTGCCAACAGCTTCGATGGAAGCATTCCATTGATCTTGGGTCAAATGAACAGCCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGTTTCATTCCTCATGAAATAGGAAAATTAACAAATTTATTAATCTTAGACCTGAGGTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTGATTCAAATTTGCTTAGTGGTTCCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATCGGGTACTTGACCCGTTTGGAAGTGCTCACCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCTTTTGTTGCATCTAGAAGGTTTAAATCTTTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTAGTTATGTGGATCTCAGCCATAACAATTTAAGTGGAAGCATTCCTTCTCAATTTGGAAACCTTTCATATTTAGACGTTCGTTACAATAATCTTTGTATCAAAAATAGAAAGGAACTTGAGTTTGTTATTCCATTCTGTTATCTGGATTACAATTCCTTTCTTGACAACGAATATTATGACTGCGATGGTCATTTAAACGACCATCATAATAAGCATTTTCGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCCATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACAGATGCATGTTTTTGGTGTACGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGTCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAATAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCAAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTCTAGTTGGCACTTATGGATATATTGCTCCAGAACTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGACAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTACAAGGCTTCAATGAATTTTTCTTTTTACGATGTCTCAATCTACCAATTGATGCAATAG 2553 0.3991 MLTASACSSCFFIVCSETKPSSCLFPDVGIATTAGTHKLSALDEEANAMHSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTDEFRTQLCSLKLNFSVFQNLVHLDLSEMGLCEFPKLSGLKKLQHLNLSYNYFEGELPFTLLDNLTQLVVLDISNNYISGTIPQELSKLERLVMLDLSANSFDGSIPLILGQMNSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLNRLTSLHLHSNLLSGFIPHEIGKLTNLLILDLRSNSLSGPIPEQIGYLNRLTSLHLDSNLLSGSIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLTIGSNRIDGCIPKEIELLLHLEGLNLSYNAISGVIPSSIFIHSSYVDLSHNNLSGSIPSQFGNLSYLDVRYNNLCIKNRKELEFVIPFCYLDYNSFLDNEYYDCDGHLNDHHNKHFRRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCNLANEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMTKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANELSAYKASMNFSFYDVSIYQLMQ* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2345 850 SMART LRR_sd22_2 229 244 - -
Ahy12g2345 850 SMART LRR_sd22_2 301 327 - -
Ahy12g2345 850 SMART LRR_sd22_2 253 279 - -
Ahy12g2345 850 SMART LRR_sd22_2 349 364 - -
Ahy12g2345 850 SMART LRR_sd22_2 157 180 - -
Ahy12g2345 850 SMART LRR_sd22_2 373 405 - -
Ahy12g2345 850 Gene3D Phosphorylase Kinase; domain 1 524 640 - -
Ahy12g2345 850 Gene3D Ribonuclease Inhibitor 90 481 IPR032675 -
Ahy12g2345 850 SUPERFAMILY L domain-like 69 223 - -
Ahy12g2345 850 ProSitePatterns Protein kinases ATP-binding region signature. 568 590 IPR017441 GO:0005524
Ahy12g2345 850 ProSiteProfiles Protein kinase domain profile. 562 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2345 850 SMART LRR_typ_2 132 156 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 229 252 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 253 277 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 349 373 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 301 325 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 397 421 IPR003591 -
Ahy12g2345 850 SMART LRR_typ_2 157 181 IPR003591 -
Ahy12g2345 850 Pfam Protein kinase domain 567 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2345 850 Pfam Leucine rich repeat 207 266 IPR001611 GO:0005515
Ahy12g2345 850 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Ahy12g2345 850 PRINTS Leucine-rich repeat signature 232 245 - -
Ahy12g2345 850 PRINTS Leucine-rich repeat signature 253 266 - -
Ahy12g2345 850 ProSitePatterns Tyrosine protein kinases specific active-site signature. 686 698 IPR008266 GO:0004672|GO:0006468
Ahy12g2345 850 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 49 848 - -
Ahy12g2345 850 Gene3D Transferase(Phosphotransferase) domain 1 641 843 - -
Ahy12g2345 850 SUPERFAMILY RNI-like 174 463 - -
Ahy12g2345 850 SUPERFAMILY Protein kinase-like (PK-like) 543 829 IPR011009 -
Ahy12g2345 850 Pfam Leucine Rich Repeat 134 150 IPR001611 GO:0005515
Ahy12g2345 850 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 49 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2345 Ahy-Chr12 111118235 111125144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2345 127 734 Receptor kinase-like Gene Family AT4G08850 39.169 1.38e-131 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2345 Pkinase 8.90E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2345 - - ahf:112728721 1361.28