Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2342 ATGAAAAAGCTGTATCAAGCTGCAAAATGCAGTTTTCGATGGGCAGAGAAAGAGACGGAGGGCTCGAAATGTGTCTTTATCTCCTGCATGCAGACAGGACCTGCTTTGTTGACCATCTCGGAACTCCAAAAATGGAGGCTACGTTTGGCAGTTGGCCAGGCCAAAATATATCACGGACTTCCTGGAACCAAATTTCATTACGACCCTAAACTCGCCCTCTTTCGCCGCAACATTGCCTCCACCTACGACGAAGGAACCACGGTTAGTATAAGGAAATTTCGGGGCATGCATAGCTTCGAGATCCAGAGTCCGCATAAAAGACGGAACGCTAAAGAGGTGCCGGCTTACAATCGCATCCGCCTCATTCTATACCGCCGGATTGTCTGCCAAGTCTCCGTCACCGTTTTCGTCATCGACCTCATAGTTGGCTTCAAACTCCTCTTTACTGTCGTTGTTATCTTCTTCCCAATCTATATCCCCGAATTCATCAACGTTGACATCGTAGCCAACCGCATCCATCCCCGTATGCTGTTCAAACTCAACGTACAGCTCTATCATTGGCACGTGAAATCAGTGCCACTTCTCTTTGTTGGCATCACCACCAATGCTGGAACTCACAAATTGTCACCCTTGGATCAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCGACGAGTTCAGGACACAACTCTGCTCTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCCAAACTAAGGGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACTATTTAGGAGGTGAGGTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTGGACTTGAGTGCCAACAGCTTCCGTGGAAGCATTCCATTGATTTTTGGTCAAATGAGCAGTCTCACACACATGAACCTTTCCAACAATCTACTATTTGGTGAGGTTCCTTTCACATTGCCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACGAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTGACAAATTTATTAACCTTAGACCTCAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGTTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATAGGGTACTTGACCCGTTTGGAAGTGCTCAGCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCATTTGTTGCATCTAGAAGTTTTAAATCTTTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCTCTCTAGTTATGTGGATCTCAGCCATAACAACAGGAACTTGAGTCTGTTATTCCACTGTTATCTGGATTACAATCCCTTTCTTGACAACGAATATTATGACTGCGATGATCATTTAAACGACCATCATAATAAGCATTTTGGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACTGCAACATCATTAAGCTTTATGGCTATTGTTTGCATAACCGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATCGAAGCACAAGAGTTGAATTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGCCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGTCAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTCCAAGGCTTCCACGAATTTGTCTTTTTATGATGTCTCAATCTACCAACTGATGCAATATCAAGTACATGTCATATGA 2778 0.4212 MKKLYQAAKCSFRWAEKETEGSKCVFISCMQTGPALLTISELQKWRLRLAVGQAKIYHGLPGTKFHYDPKLALFRRNIASTYDEGTTVSIRKFRGMHSFEIQSPHKRRNAKEVPAYNRIRLILYRRIVCQVSVTVFVIDLIVGFKLLFTVVVIFFPIYIPEFINVDIVANRIHPRMLFKLNVQLYHWHVKSVPLLFVGITTNAGTHKLSPLDQEANAMLSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTDEFRTQLCSLKLNFSVFQNLVHLDLSEMGLCEFPKLRGLKKLQHLNLSYNYLGGEVPFTLLENLTQLLVLDLSANSFRGSIPLIFGQMSSLTHMNLSNNLLFGEVPFTLPNLTQLLVLDLSQNELSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLNRLTSLHLHSNLLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLSIGSNRIDGCIPKEIEHLLHLEVLNLSYNAISGVIPSSIFILSSYVDLSHNNRNLSLLFHCYLDYNPFLDNEYYDCDDHLNDHHNKHFGRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHCNIIKLYGYCLHNRCMFLVYEYLERGSLFCNLANEIEAQELNWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMSKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANELSASKASTNLSFYDVSIYQLMQYQVHVI* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2342 925 Pfam Protein kinase domain 636 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2342 925 ProSiteProfiles Protein kinase domain profile. 631 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2342 925 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 412 917 - -
Ahy12g2342 925 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 412 917 - -
Ahy12g2342 925 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 219 430 - -
Ahy12g2342 925 Gene3D Phosphorylase Kinase; domain 1 593 709 - -
Ahy12g2342 925 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 219 430 - -
Ahy12g2342 925 Gene3D Ribonuclease Inhibitor 212 369 IPR032675 -
Ahy12g2342 925 Gene3D Ribonuclease Inhibitor 370 423 IPR032675 -
Ahy12g2342 925 Gene3D Transferase(Phosphotransferase) domain 1 710 915 - -
Ahy12g2342 925 PRINTS Leucine-rich repeat signature 398 411 - -
Ahy12g2342 925 PRINTS Leucine-rich repeat signature 377 390 - -
Ahy12g2342 925 SUPERFAMILY L domain-like 216 545 - -
Ahy12g2342 925 Pfam Leucine Rich Repeat 303 332 IPR001611 GO:0005515
Ahy12g2342 925 Pfam Leucine rich repeat 472 528 IPR001611 GO:0005515
Ahy12g2342 925 ProSitePatterns Tyrosine protein kinases specific active-site signature. 755 767 IPR008266 GO:0004672|GO:0006468
Ahy12g2342 925 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Ahy12g2342 925 Gene3D Ribonuclease Inhibitor 424 564 IPR032675 -
Ahy12g2342 925 SMART LRR_sd22_2 301 328 - -
Ahy12g2342 925 SMART LRR_sd22_2 446 461 - -
Ahy12g2342 925 SMART LRR_sd22_2 398 424 - -
Ahy12g2342 925 SMART LRR_sd22_2 470 496 - -
Ahy12g2342 925 SUPERFAMILY Protein kinase-like (PK-like) 612 898 IPR011009 -
Ahy12g2342 925 SMART LRR_typ_2 446 470 IPR003591 -
Ahy12g2342 925 SMART LRR_typ_2 398 422 IPR003591 -
Ahy12g2342 925 SMART LRR_typ_2 374 397 IPR003591 -
Ahy12g2342 925 SMART LRR_typ_2 494 518 IPR003591 -
Ahy12g2342 925 SMART LRR_typ_2 326 349 IPR003591 -
Ahy12g2342 925 SMART LRR_typ_2 301 325 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2342 Ahy-Chr12 111057149 111063751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2342 253 803 Receptor kinase-like Gene Family AT4G08850 38.824 1.11e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2342 Pkinase 2.20E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2342 - - ahf:112730549 1823.14