Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2340 ATGGCTATATCATGCACTTGCATTATTATTTTGATGTTAGTGCCACTTGTCTTTGTTGGCATCACCACCAATGCTGGAACTCACAAATTGTCACCCTTGGATCAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAAGAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCCTCGAGTTCATGACACAACTCTGCTTTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCTAAACTAAGTGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACTATTTAGGAGGTGAGCTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTGGACATTTCTAACAATTATATTATTAGTGGTACAATTCCACAAGAACTAATCAAACTGGAGAGACTTGTCACGTTGGACTTGAGTGCCAACGCGTTCAGCGAAGGCATTCCATTGATCTTGGGTCAAATGAACAGCCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATCGGGTACTTGACCCGTTTGGAAGTGCTCACCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCTTTTGTTGCATCTAGAAGGTTTAAATCTTTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTAGTTATGTGGATCTCAGCCATAACAATTTAAGTGGAAGCATTCCTTCTCAATTTGGAAACCTTTCATATTTAGACGTTCGTTACAATAATCTTTGTATCAAAAATAGAAAGGAACTTGAGTTTGTTATTCCATTCTGTTATCTGGATTACAATTCCTTTCTTGACAACGAATATTATGACTGCGATGGTCATTTAAACGACCATCATAATAAGCATTTTCGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCCATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACAGATGCATGTTTTTGGTGTACGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGTCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAATAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCAAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTCTAGTTGGCACTTATGGATATATTGCTCCAGAACTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTCTGACAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATACGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTCCAAGGCTTCAATGAATTCTTCTTTTTTTGATGTCTCAATCTACCAATTGATGCATTAG 2241 0.4003 MAISCTCIIILMLVPLVFVGITTNAGTHKLSPLDQEANAMLSISKELWSNQHKNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTLEFMTQLCFLKLNFSVFQNLVHLDLSEMGLCEFPKLSGLKKLQHLNLSYNYLGGELPFTLLENLTQLLVLDISNNYIISGTIPQELIKLERLVTLDLSANAFSEGIPLILGQMNSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLTIGSNRIDGCIPKEIELLLHLEGLNLSYNAISGVIPSSIFIHSSYVDLSHNNLSGSIPSQFGNLSYLDVRYNNLCIKNRKELEFVIPFCYLDYNSFLDNEYYDCDGHLNDHHNKHFRRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCNLANEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTLTKPSTQQLLVKDVLDPRIPLPKSRKDTQDVVHVVKLALACLSSDPKSRPSMQDVANELSASKASMNSSFFDVSIYQLMH* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2340 746 PRINTS Leucine-rich repeat signature 224 237 - -
Ahy12g2340 746 PRINTS Leucine-rich repeat signature 245 258 - -
Ahy12g2340 746 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 264 - -
Ahy12g2340 746 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 236 744 - -
Ahy12g2340 746 Pfam Leucine rich repeat 199 256 IPR001611 GO:0005515
Ahy12g2340 746 Gene3D Ribonuclease Inhibitor 33 317 IPR032675 -
Ahy12g2340 746 Pfam Leucine Rich Repeat 125 142 IPR001611 GO:0005515
Ahy12g2340 746 ProSitePatterns Tyrosine protein kinases specific active-site signature. 582 594 IPR008266 GO:0004672|GO:0006468
Ahy12g2340 746 ProSiteProfiles Protein kinase domain profile. 458 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2340 746 Pfam Protein kinase domain 463 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2340 746 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 41 264 - -
Ahy12g2340 746 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 236 744 - -
Ahy12g2340 746 Gene3D Ribonuclease Inhibitor 318 360 IPR032675 -
Ahy12g2340 746 Gene3D Phosphorylase Kinase; domain 1 420 536 - -
Ahy12g2340 746 SUPERFAMILY L domain-like 38 355 - -
Ahy12g2340 746 Gene3D Transferase(Phosphotransferase) domain 1 537 740 - -
Ahy12g2340 746 ProSitePatterns Protein kinases ATP-binding region signature. 464 486 IPR017441 GO:0005524
Ahy12g2340 746 SUPERFAMILY Protein kinase-like (PK-like) 439 725 IPR011009 -
Ahy12g2340 746 SMART LRR_typ_2 221 244 IPR003591 -
Ahy12g2340 746 SMART LRR_typ_2 245 269 IPR003591 -
Ahy12g2340 746 SMART LRR_typ_2 148 173 IPR003591 -
Ahy12g2340 746 SMART LRR_typ_2 123 147 IPR003591 -
Ahy12g2340 746 SMART LRR_typ_2 293 317 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2340 Ahy-Chr12 111027326 111029722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2340 154 630 Receptor kinase-like Gene Family AT4G08850 41.498 1.63e-106 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2340 Pkinase 1.20E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2340 - - ahf:112728721 1193.33