Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2339 ATGAGTGCCAACACCATGGTGGCAGCATCAAATTCCTCGAACGAGGAACAAAAGGCCTTGCTCCATAGTGGGTGGACAGAAGGTCGCGACATCTCAAAACATTGTAACTGGACTGGTATTGTGTGCAATGACGCTGGAAGTGTCATAGAGATTTCAACAAGGCTTTATTTTTTTATCCCTCCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTGATCCGTCTAGAACTTACTGGTTTGGAACTCAAGGGAACCATTCCCAGTGAAATAAGCACTCTTACAAAGCTTATGTATCTTGATCTCTCTTCTAACTATCTTGAAGGTCCCATCCCTGTAGAATTTGAGAACCTGTTCCATTTGAAAGCTTTAGACCTTTCCAATAACAATATTTCTGGTGTTATACCATCTGGGATTGGACAACTCTCTAGGCTTTCAACTTTAGATATTTCCAACAATAGCCTTAAGGGACCAATTCCATTTGGTATTCTAAATCATTGCAGTTATGTGCAGCTAAGTAACAACCTTTTAAGTGGACATATTCCTTCTCAAATTGGCAATCTTTCTTACCTAGACCTCAGTAATAATAGCCTCTCAGGAAGCATACCAGAGGGACTCCATTCCGTTCCATATCTCAATATATCTTACAATTCCTTTGTTCCAGATACACACTTTTGTGGTTTTCCAAGTGAAGCACTGATTGGTAATAAGCAGTCACCCTCTTGCTCTTCTCCATATAGTACCATAGCACTAGTTTCCCTTGCTGCCTTGAATTACCTCTTCATTACAACAGTGTTCATATGGCTTGGAATCAGTGTCTTCTGTCCCCTCCAAAGAGAGTACGGATTTGAGGAAAGAAGCAAGAATGGGGATATCTTCTCAATTTGGAACTATGATGGTAAAATTGCATTTAAAGACATAATCAAAGCCACAGAAGACTTTGATATAAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCACAGCTTCCTAGTGGCAGAAATGTTGCACTAAAGAAACTTCACAATACAGAGTCTGAAAATCCATCATTTTACAAGAGTTTTAGCAATGAGGTCAAGGTCTTGACAGAAATTCGCCACCGCAACATCATTAGGCTTTATGGTTTTTGTTTGCACAACAGCTGTATGTTTTTGATGTATGAGTATATGGAAAAGGGAAGCTTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGTTGAATTGGAGTAAGAGAGTAAACATTATCAATGGGACTGCATTTGCTCTCACTCATATGCACCATCATTGCACTCCACCCATTGTCCATCGAGATGTAACTAGTACCAATGTTTTGTTGACTTCAAATTTAGAAGCTTGTCTATTAGATTTTGGTACAGCTAAACTACTTTCTTCTGATTCATCTAATCAAACTCTATTAGCTGGCACTCCCGGATACGTTGCTCCAGAACTGGCTTACAGCATCAACGTGACAACAAAATGTGATGTTTATAGCTTTGGAGTGGTGACTTTGGAAACAATAATGGGAGAACATCCTAAGGAACTACTTTCCAATATGTCAAAACCATCTCCAAAGATCATGATCAAAGATGTATTGGATTCACGTATCCCATTGCCCTTTCTTCGAAAAGACATGCGGGATATTGTACTTGTTCTAACATTAACATTGGCATGCTTGCATCCCAACCCAAAATCAAGACCTTCAATACAGGACATAGCTAATGAGCTTTTGTTTTCAAAGTCGCCATTGCTTTGGCATTTTGATGGTATTTCAATTCACCAACTTGTGAATCAAGAAATATACGCAATAGGTAAAAATTAG 1839 0.3899 MSANTMVAASNSSNEEQKALLHSGWTEGRDISKHCNWTGIVCNDAGSVIEISTRLYFFIPPSELRNFNFTAFPNLIRLELTGLELKGTIPSEISTLTKLMYLDLSSNYLEGPIPVEFENLFHLKALDLSNNNISGVIPSGIGQLSRLSTLDISNNSLKGPIPFGILNHCSYVQLSNNLLSGHIPSQIGNLSYLDLSNNSLSGSIPEGLHSVPYLNISYNSFVPDTHFCGFPSEALIGNKQSPSCSSPYSTIALVSLAALNYLFITTVFIWLGISVFCPLQREYGFEERSKNGDIFSIWNYDGKIAFKDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRNVALKKLHNTESENPSFYKSFSNEVKVLTEIRHRNIIRLYGFCLHNSCMFLMYEYMEKGSLFYNLAIDEEAQELNWSKRVNIINGTAFALTHMHHHCTPPIVHRDVTSTNVLLTSNLEACLLDFGTAKLLSSDSSNQTLLAGTPGYVAPELAYSINVTTKCDVYSFGVVTLETIMGEHPKELLSNMSKPSPKIMIKDVLDSRIPLPFLRKDMRDIVLVLTLTLACLHPNPKSRPSIQDIANELLFSKSPLLWHFDGISIHQLVNQEIYAIGKN* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2339 612 ProSiteProfiles Protein kinase domain profile. 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2339 612 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Ahy12g2339 612 Gene3D Ribonuclease Inhibitor 3 166 IPR032675 -
Ahy12g2339 612 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515
Ahy12g2339 612 PRINTS Leucine-rich repeat signature 144 157 - -
Ahy12g2339 612 PRINTS Leucine-rich repeat signature 123 136 - -
Ahy12g2339 612 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 75 606 - -
Ahy12g2339 612 Gene3D Ribonuclease Inhibitor 167 249 IPR032675 -
Ahy12g2339 612 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Ahy12g2339 612 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
Ahy12g2339 612 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 219 - -
Ahy12g2339 612 SUPERFAMILY L domain-like 33 222 - -
Ahy12g2339 612 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Ahy12g2339 612 SUPERFAMILY Protein kinase-like (PK-like) 297 585 IPR011009 -
Ahy12g2339 612 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 14 219 - -
Ahy12g2339 612 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 75 606 - -
Ahy12g2339 612 Gene3D Transferase(Phosphotransferase) domain 1 395 588 - -
Ahy12g2339 612 Pfam Protein kinase domain 321 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2339 612 Gene3D Phosphorylase Kinase; domain 1 284 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2339 Ahy-Chr12 111022112 111024318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2339 77 488 Receptor kinase-like Gene Family AT4G08850 41.822 2.89e-93 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2339 Pkinase 5.00E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2339 - - adu:107475713 994.571