Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2328 ATGCTGAGAAAGTGTAGTAGTAACTTTGCTTTGCTTATTATAGCAGTGATGCTTCTGTTTTCCACCACAACCTCTTATGTAATACTCCCTCCCAACAAAACCGCTATGGCACCGGCTTTGTCTTCCTTCAATAATTCAGAGAGACAGGCTTTAATACAGAGTGGTTGGTGGAGTTATTACCACAATCTCTCAAACTCAAATCATTGCTATTGGATTGGCATCTACTGTAAAACAGCAGGAAGTGTTTCAGAGATTGATGGATGGGAATTGGATATTAATTCCAAATTTTTGCTTCTACAGAACTTGAATCTCACCGCCTTTTCGAATTTGGTCTCTTTGAATCTTCATGGAATGGGACTTTCTGGAAGCATCCCAAAAGAAATTGGTACCCTTACAAAGCTTGCTGGTCTTGATCTATCCAATAATAATCTTCATAGTGAGTTACCTTCAACACTTTCAAACCTCACTCAACTTGTGGAATTAAATGTTTCTTTCAATTCTCTTAGTGGCATCATTCCTTCTACTTTGGGTCTATTGGATGAATTGGAATACCTCACTCTCACTTCAAACCAAATTGAAGGTTCCATACCACTAGAACTTGGGAAGGTGAATTTGAAATATCTCAACCTTGAATCAAATCAAATTGGAGGTTCTATACCAGCACAAATAGGGAATTTAACAAGCTTATTCGCACTATATCTTTCCAATAACTCCTTTTCTGGTTCAATCCCCTTTCAAATAGGAGCTTTAACTCAGTTGCAAGAGTTGTACATAGGGTTCAATCAGATTAATGGTTCTATTCCCTCACAATTTAAAAACTTGTCTAATCTACAAGTTTTAGATCTTTCTTATAACAAGTTGTCTGGTGTTATTCCTCCACAACTTTTTCTACTTGCCAGCTTGAATTCTTTACTTCTCTCATCAAATCAATTGTTTGGTTCAATTCCATCAAATATTGCTAACACAAATATTTCATATCTTAATCTCTCTCACAACAAGCTAACAGGGCCTATTCCATTTCCTATCCATACTTGTTCTTCCCATTTGACACTAGATTTAAGTTACAACTTGTTGAATGGAAACATAGTTTCTCAAACTGGTTGTGTTGTTAATCTGAACCTTAGTCATAATTCTCTCAGTGGTGACATCCCATCTACCTTTAGTGTGAATTCAATGATGGAGAGTTTGGATCTCAGTTATAATAATTTCACAGGTAAACTGCACAAGGAACTTGCTAATCTCGAATACATAAACCTTTCATACAATTCTCTTGACTTTTCTCAAGACACTGATTATTGTTACTTTCAACAAGAGTCATTAATCGGTTGCAACACACCAAACTTCGCATCCTGCCATTTTACCCCAAAAACCATGCTTCCACATACCAGTAAAACTAAGCACCTCCTTGTAATAGCTCTTCCTGTCACATTCATCATTCTTTTCACAATTCTGGCATCACTGTTGTGGGCAAGACGTACGAAAAGTAGAAAAATTGAGGTGGAAAGAACATCAAAGAATGGAGACTTGTTTTCTATATGGAACTATGATGGGAAAATTGCATTTGAAGATATCATTGAAGCAACACAGGACTTTGATATCAGATATTGCATAGGAACTGGTGCATATGGTAGTGTATATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCAGTGAAGAAACTTCACCAAAGGGAGTCACAGAATCCTTCTTTTGACAAGAGCTTTCGCAACGAGGTAAAGATGTTAACAGAAATCCGCCATAGAAACATTGTCAAGCTCCACGGATTTTGTCTTCATAGTCAGTGTATGTTTCTAATTTATGAATACATGGAAAGGGGAAGCTTATTTTATGCCTTGAGAATTAATGATGAAGCTGAGGAGCTAACTTGGAGCCATAGGGTGAATATACTTAGTGGAGCTGCTAATGCTTTGTCTTACATGCATCATGATTGTTCCCCACCAATAGTTCACAGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCTGACTTTGGCACCGCTAGAGTTCTTGATCCAGATTCTTCAAACCAAACCTTGAAAGTTGGAACATATGGATATCTTGCTCCAGAATTGGCATATACATTGAGTGTAACAGAAAAATGTGATGTATATAGTTTTGGAGTGGTGGCATTGGAAACAATAATGGGAAGACATCCAGGAGATCTTATCTTGTCTTTGTTCAACTCTTCTAACAAAAACATAATGGTAAAAGATCTCTTGGATTCACGCATCAGTTTACCATTATGTCAAAAGGATGCTCAAGCTATAGTTCAAGTGGTAACATTGGCATTGACATGCTTGCGCTCTAATCCAAAATCAAGACCATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGTCTTTGCCTTTGTCTGAAATCACAGTCCATCAACTGATAGCTTAG 2463 0.3731 MLRKCSSNFALLIIAVMLLFSTTTSYVILPPNKTAMAPALSSFNNSERQALIQSGWWSYYHNLSNSNHCYWIGIYCKTAGSVSEIDGWELDINSKFLLLQNLNLTAFSNLVSLNLHGMGLSGSIPKEIGTLTKLAGLDLSNNNLHSELPSTLSNLTQLVELNVSFNSLSGIIPSTLGLLDELEYLTLTSNQIEGSIPLELGKVNLKYLNLESNQIGGSIPAQIGNLTSLFALYLSNNSFSGSIPFQIGALTQLQELYIGFNQINGSIPSQFKNLSNLQVLDLSYNKLSGVIPPQLFLLASLNSLLLSSNQLFGSIPSNIANTNISYLNLSHNKLTGPIPFPIHTCSSHLTLDLSYNLLNGNIVSQTGCVVNLNLSHNSLSGDIPSTFSVNSMMESLDLSYNNFTGKLHKELANLEYINLSYNSLDFSQDTDYCYFQQESLIGCNTPNFASCHFTPKTMLPHTSKTKHLLVIALPVTFIILFTILASLLWARRTKSRKIEVERTSKNGDLFSIWNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYRAQLPSGKVVAVKKLHQRESQNPSFDKSFRNEVKMLTEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYALRINDEAEELTWSHRVNILSGAANALSYMHHDCSPPIVHRDVTSNNILLNSELHAVVSDFGTARVLDPDSSNQTLKVGTYGYLAPELAYTLSVTEKCDVYSFGVVALETIMGRHPGDLILSLFNSSNKNIMVKDLLDSRISLPLCQKDAQAIVQVVTLALTCLRSNPKSRPSMQQVAHELSNFKQSSLSLPLSEITVHQLIA* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2328 820 SUPERFAMILY Protein kinase-like (PK-like) 514 798 IPR011009 -
Ahy12g2328 820 SMART LRR_sd22_2 179 200 - -
Ahy12g2328 820 SMART LRR_sd22_2 250 276 - -
Ahy12g2328 820 SMART LRR_sd22_2 131 157 - -
Ahy12g2328 820 SMART LRR_sd22_2 202 228 - -
Ahy12g2328 820 Gene3D Phosphorylase Kinase; domain 1 491 609 - -
Ahy12g2328 820 SUPERFAMILY RNI-like 104 426 - -
Ahy12g2328 820 ProSiteProfiles Protein kinase domain profile. 531 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2328 820 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 46 818 - -
Ahy12g2328 820 ProSitePatterns Tyrosine protein kinases specific active-site signature. 655 667 IPR008266 GO:0004672|GO:0006468
Ahy12g2328 820 PRINTS Leucine-rich repeat signature 274 287 - -
Ahy12g2328 820 PRINTS Leucine-rich repeat signature 134 147 - -
Ahy12g2328 820 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 46 818 - -
Ahy12g2328 820 Gene3D Ribonuclease Inhibitor 203 450 IPR032675 -
Ahy12g2328 820 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
Ahy12g2328 820 Gene3D Ribonuclease Inhibitor 37 202 IPR032675 -
Ahy12g2328 820 Pfam Leucine rich repeat 133 192 IPR001611 GO:0005515
Ahy12g2328 820 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Ahy12g2328 820 Pfam Protein kinase domain 536 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2328 820 Pfam Leucine Rich Repeat 204 226 IPR001611 GO:0005515
Ahy12g2328 820 CDD STKc_IRAK 537 798 - -
Ahy12g2328 820 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Ahy12g2328 820 Pfam Leucine Rich repeat 321 336 IPR001611 GO:0005515
Ahy12g2328 820 Pfam Leucine Rich repeat 390 405 IPR001611 GO:0005515
Ahy12g2328 820 SMART LRR_typ_2 204 226 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 411 434 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 250 273 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 179 203 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 155 178 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 274 298 IPR003591 -
Ahy12g2328 820 SMART LRR_typ_2 131 154 IPR003591 -
Ahy12g2328 820 Gene3D Transferase(Phosphotransferase) domain 1 610 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2328 Ahy-Chr12 110805848 110808686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2328 104 703 Receptor kinase-like Gene Family AT4G08850 37.953 1.16e-125 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2328 Pkinase 1.70E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2328 - - gmx:100789677 863.988