Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2327 ATGGTGGCAAAGTGTAGTAACTGTGCTTTACTTATTATAGCAGAGGTGCTTTTGTTTTCTACCACCTGCTCTTATAGGATATTTCCACCAAATGCACCCAACCTCACCACCGTGGAGCCGCCTTCGTCTTCCTTCAATAATTCGGAAAGACAGGCATTGATTCAGAGTGGTTGGTGGGGTAGTCATCACGCCAATGACCCAAACCATTGCTATTGGCCGGGCGTCAGCTGCGACGATGCTGGAAGTGTTGTAGGGATTTACGGATGGGAATTGAATTACAAATCCAAATTATTGCGGCTACAGGCCTTGAACTTCACGGCCTTCCCCAATTTGGATTCTCTGGATCTTGATGGAATGGGACTTATCGGAAGCATCCCCAAAGAAATTGGTACTCTCACAAAACTTTCTAATCTTGTTTTGTCGAATAATAGTCTTTATGGTAAGCTGCCTCCAACACTTTCAAATCTCACTCAACTTTTGTCCCTTTATGTTTCTTTCAATTCTCTTAGTGGCAGCATTCCTTCTACTTTTGGTCTATTGGAGAATTTGATATTTCTCAAATTAGATTCAAATCAAATTGAAGGTCCTATACCACTACAAATAGGGAATTTGAGTAATCTTATATGGTTGAATCTTTCACACAATTTACTCAATGGTTCAATTCCTTTTACCTTGGGACAATCAAAGAATTTGAGATCTCTCTACTTAGATTCAATCAAATTGAAGGACATATACAATAGAAATAGGAAATTGAAACAATTACAAATATTAAATCTTTCAAGTAACTATCTCTCTGGTCAAATACCTCTTCAAATAGAAGCATTGGTGTCTTTACAGGAGTTATACATAGAATTCAATCAAATAAATGGTTCCATTCCTTCAGAGTTTCAAAATTTGATCAATTTACACACTTTATATCTTTCTCATAATATGATATCTGGTGTTATACCACCTAAGCTGTTTCAGCTCACGAATTTGGTCTCTCTTCATCTTTCTAACAATCAATTAAGCGGAAACATACCATCAGAGATAAGAAATCTTGATTCTCTTGCGATTGGTAGCATACCTTTTTTGTCTATTAGTGATAATCCTTATATTCCTTGGAGAGAATATTCTTTATCAAGTTTGGATCTTAGCTACAATAATCTCACAGACATCATCGAAGCAACACAGGATTTTGATATCAGATACTGCATAGAACTGGCGCTTATGGCAGTGTGTACAAAGCCCAACTTCCAAGTGGCAAATGTTGCATTGAAGAAACTTCACCAAGAGAGTCACAAATCCATCTTTGACAAGAGCTTCCGCAACGAGATTAAGATGTTATCACAAATTCGTCATAGAAACATTGTCAAGCTTCATGATTTTGTCTCATGTTTTTTGGTATCTACATGA 1395 0.3713 MVAKCSNCALLIIAEVLLFSTTCSYRIFPPNAPNLTTVEPPSSSFNNSERQALIQSGWWGSHHANDPNHCYWPGVSCDDAGSVVGIYGWELNYKSKLLRLQALNFTAFPNLDSLDLDGMGLIGSIPKEIGTLTKLSNLVLSNNSLYGKLPPTLSNLTQLLSLYVSFNSLSGSIPSTFGLLENLIFLKLDSNQIEGPIPLQIGNLSNLIWLNLSHNLLNGSIPFTLGQSKNLRSLYLDSIKLKDIYNRNRKLKQLQILNLSSNYLSGQIPLQIEALVSLQELYIEFNQINGSIPSEFQNLINLHTLYLSHNMISGVIPPKLFQLTNLVSLHLSNNQLSGNIPSEIRNLDSLAIGSIPFLSISDNPYIPWREYSLSSLDLSYNNLTDIIEATQDFDIRYCIELALMAVCTKPNFQVANVALKKLHQESHKSIFDKSFRNEIKMLSQIRHRNIVKLHDFVSCFLVST* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2327 464 Gene3D Ribonuclease Inhibitor 271 400 IPR032675 -
Ahy12g2327 464 Gene3D Ribonuclease Inhibitor 43 196 IPR032675 -
Ahy12g2327 464 Gene3D Phosphorylase Kinase; domain 1 405 462 - -
Ahy12g2327 464 Gene3D Ribonuclease Inhibitor 197 270 IPR032675 -
Ahy12g2327 464 SMART LRR_sd22_2 275 304 - -
Ahy12g2327 464 SMART LRR_sd22_2 132 158 - -
Ahy12g2327 464 SMART LRR_sd22_2 323 349 - -
Ahy12g2327 464 SUPERFAMILY L domain-like 66 400 - -
Ahy12g2327 464 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Ahy12g2327 464 ProSiteProfiles Leucine-rich repeat profile. 372 393 IPR001611 GO:0005515
Ahy12g2327 464 PANTHER UNNAMED PRODUCT 105 456 - -
Ahy12g2327 464 PANTHER UNNAMED PRODUCT 42 383 - -
Ahy12g2327 464 SMART LRR_typ_2 156 179 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 299 323 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 132 155 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 251 274 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 204 228 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 275 298 IPR003591 -
Ahy12g2327 464 SMART LRR_typ_2 324 347 IPR003591 -
Ahy12g2327 464 SUPERFAMILY Protein kinase-like (PK-like) 416 458 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2327 Ahy-Chr12 110799015 110800895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2327 137 398 Receptor kinase-like Gene Family AT3G11080 28.344 3.22e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy12g2327 LRR_8 2.40E-09 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2327 - - ahf:114924930 911.753