Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2317 ATGTCACCTTTCAATATCACATTTCTAGTCACAATTTTCCTCTCTCTTTTCTTCCCAACCCTTGGTCAAGTTGATCCAACATTGTCAAGGCCTAAATCCCAAACATTATCATACATAGAGTCCTCTTGCAATGGCACTCTCTACCGTGAACTATGCATCCGTTCCCTTTCGAAATTCGCCAGCACCAATGAAATCGACGGTCCACAACACTTAGCACATGTTGCCTTGTCAATTAGCCTTGCTAGGGCAATCCACACAAAGAACTACTTGGTGGGAGTTTCCAAGGAACTCGACGCGATTAACAATCTCAACAACAATAACAATAACAATAACGACAGAAAGAAGAGAAGGGAGTACCAAACAATTCAAGATTGTGTGACACAACTAAGTGATAGTGTTGACCAACTTAGTCAATCAATCAAGGAGCTAAGAAGGATGAACAACAAAAGTAGATCAACAATCAATGATGATTTCTTGTGGCACATTAACAATGTTGAGACATGGGTTAGCACTGCCTTAACAGATGCTAGTAGTTGTGTCTATGCATTCCCTGGCCATAGAATGAGTAAGAGAACAGCTTCAATTAGGGGTAAGGCCATGAATGTTGCACAAGTTACTAGCAATGCATTAGCCTTCATTCATAAGTACATGGAAGCAGCAACAAGGAACACCAAGCCTTGA 681 0.4097 MSPFNITFLVTIFLSLFFPTLGQVDPTLSRPKSQTLSYIESSCNGTLYRELCIRSLSKFASTNEIDGPQHLAHVALSISLARAIHTKNYLVGVSKELDAINNLNNNNNNNNDRKKRREYQTIQDCVTQLSDSVDQLSQSIKELRRMNNKSRSTINDDFLWHINNVETWVSTALTDASSCVYAFPGHRMSKRTASIRGKAMNVAQVTSNALAFIHKYMEAATRNTKP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2317 226 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 216 IPR035513 -
Ahy12g2317 226 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 219 - -
Ahy12g2317 226 SMART PMEI_2 34 212 IPR006501 GO:0004857
Ahy12g2317 226 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 216 IPR006501 GO:0004857
Ahy12g2317 226 PANTHER BNAANNG18590D PROTEIN 8 219 - -
Ahy12g2317 226 Coils Coil 126 153 - -
Ahy12g2317 226 Pfam Plant invertase/pectin methylesterase inhibitor 38 211 IPR006501 GO:0004857
Ahy12g2317 226 CDD PMEI-like_3 41 216 - -
Ahy12g2317 226 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 216 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2317 Ahy-Chr12 110725601 110726489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2317 21 213 Carbohydrate Esterase AT3G49220 25.907 6.06e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2317 - - gmx:100807870 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2317 12 110725601 110726489 Ahy2g2001 2 94774142 94775132 hybridization