Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2315 ATGCCCAAATTTTCCATACTAGTCTTTCTCCTTCTTCTCTTCACCACCAACACTTTCTCCCTCCAACAAGAAATAGAGCTACTAAAAATGACCCAAACCCAAGTTTCACAAATCATGAACAATTTGTTAGGGAAACTTGGAAATGAAGCCATGCTAGTTGATGATCATTCACTACACCAAAATTATTCAAGTACTAGTGTGGCTCTAAGAGATTGTGCTAGGCTCTATGAGGAGAGTGAGTATAGGCTTTCTTACATGATGAACTCAATGAATAGTAGCTATTATTATTATGACAATGATGATGCACTTTCTTGGGTTAGTGCTTTGATGACAAACCACAAAACTTGTTTGGATGGATTGAAGGAAAAAGGGTATGTTGGTGCTCATGATGAGGTTTTGGAAAATGGAAACTTGACCATGTTGCTTGATCAAGCTCTTGGTTTGTATGCTAAGAGAAAAGGCAAAGCAAAACCAAAAGGAGCACGAGAGAGAGCATTTTCCAGATCATCACCAAGTAATGGTGGAATAACGTTAGCATCATGGAATCCATCAACATCGAAAGCAGACTTCATAGTATCACAAGATGGTTCAGGAACACACAAAACAATAAGAGATGCAGTGGAAGCACTTGCTTCAAGGGGCAGCAAGAATCAAGAAAGAACAATTATTTATGTTAGAGCAGGTGTGTACCATGAGAAGGTTGTGATTGGATCCAAATTGAATAATGTGATGTTTGTTGGAGATGGCATGGACAGAACCATTGTCACTGGAAGCAGAAGTGCTGCTGATGGTTCTACTCTTGGTTCAGCCACATTTGATATATCTGGAGATGGATTTTGGGCAAGAGACATGACATTTGAAAACACAGCAGGACCAAGAAAGCACCAAGCAGTAGCACTAAAATCAGGTTCAGACTTTTCAGTTTTCTACAGGTGCAGATTCAGAGCATACCAAGACACACTCTATGTCTATGCTAACCGCCAATTCTACCGAGATTGCCAAATCTATGGAACCATAGACTTCATCTTCGGAGATGCCACAGTTGTCATTCAAAACAGTGACATCTATGTGAGAAAACCAATGTCGTCCCAATCAAACTATATAACAGCACAAGGGAGAGAACATCCTACAGAACCAACTGGGATTTCAATAATCAATTGTAAGGTTAGGCCAACAAGTGATTTTGTTACATCTGAGAGTTCAATCAAGACATTCTTGGGTAGGCCTTGGAAGAAGTATTCTAGGACTGTGGTGATTAAGAGTGATTTGGATGGTTTGATTGATCCCAAAGGGTGGGGGCCATGGGACGGTGAATTTGCAATTAGGACTTTGTATTATGGTGAGTATATGAATTATGGGAGTGGTGCTTCTTTAAGGAATAGGGTTAATTGGCCTGGCTTTCATGTTTTGAATAGTGCTAATGAGGCTTATCCTTTTAGTGTTGGTGAGTTCTTGCAAGGTGGTAGGTGGATTCCAGCTTCTGGGGTTCCATTTTCCTCTGGGATCTAA 1509 0.4036 MPKFSILVFLLLLFTTNTFSLQQEIELLKMTQTQVSQIMNNLLGKLGNEAMLVDDHSLHQNYSSTSVALRDCARLYEESEYRLSYMMNSMNSSYYYYDNDDALSWVSALMTNHKTCLDGLKEKGYVGAHDEVLENGNLTMLLDQALGLYAKRKGKAKPKGARERAFSRSSPSNGGITLASWNPSTSKADFIVSQDGSGTHKTIRDAVEALASRGSKNQERTIIYVRAGVYHEKVVIGSKLNNVMFVGDGMDRTIVTGSRSAADGSTLGSATFDISGDGFWARDMTFENTAGPRKHQAVALKSGSDFSVFYRCRFRAYQDTLYVYANRQFYRDCQIYGTIDFIFGDATVVIQNSDIYVRKPMSSQSNYITAQGREHPTEPTGISIINCKVRPTSDFVTSESSIKTFLGRPWKKYSRTVVIKSDLDGLIDPKGWGPWDGEFAIRTLYYGEYMNYGSGASLRNRVNWPGFHVLNSANEAYPFSVGEFLQGGRWIPASGVPFSSGI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2315 502 Pfam Plant invertase/pectin methylesterase inhibitor 56 147 IPR006501 GO:0004857
Ahy12g2315 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 151 IPR035513 -
Ahy12g2315 502 Gene3D - 183 502 IPR012334 -
Ahy12g2315 502 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 9 501 - -
Ahy12g2315 502 PANTHER PECTINESTERASE 9 501 - -
Ahy12g2315 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 129 IPR035513 -
Ahy12g2315 502 ProSitePatterns Pectinesterase signature 2. 335 344 IPR033131 -
Ahy12g2315 502 CDD PMEI-like_4 40 152 - -
Ahy12g2315 502 Pfam Pectinesterase 189 487 IPR000070 GO:0030599|GO:0042545
Ahy12g2315 502 SUPERFAMILY Pectin lyase-like 184 501 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2315 Ahy-Chr12 110692085 110698006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2315 7 502 Carbohydrate Esterase AT3G60730 47.510 1.19e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2315 K01051 - gmx:100792852 600.512