Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2295 ATGAGATTCAAGCTCGGGAAGCGTGCACTTCGGGTCACCCGCTGGGTCTTCAGACGGATCAGGATCCGACCCGTGTACCGACGGTTGGATGGATCATCAGGGAAGCCCATGTCAAAGCTTCTCAATTGGGGCCGCAAGTTGACTAGTGGGGCGAAGTTATTATGTAATTCTACAAAAATCGGGTCGGGTTATACTCGGGTTGGTTCTGACCCGAATCCTCCTGTGCCTAAGGGATACTTGGCTGTGTATGTAGGGCAAAAGGACGGTGGCGAGTTCCGGCGCGTGCTTGTGCCGGTGGTTTACTTCAACCATCCCTTATTTGGAGAGTTGCTTCGCGAGTCGGAGGCCGAGTTCGGATACCACCACCCGGGCGGGATCACGATACCTTGCCGGGTCACTGAGTTTGAACAAGTCAAGACCCGGATTGCATCCGGATCGGCTTGTAAGAGACTCTAG 456 0.5439 MRFKLGKRALRVTRWVFRRIRIRPVYRRLDGSSGKPMSKLLNWGRKLTSGAKLLCNSTKIGSGYTRVGSDPNPPVPKGYLAVYVGQKDGGEFRRVLVPVVYFNHPLFGELLRESEAEFGYHHPGGITIPCRVTEFEQVKTRIASGSACKRL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2295 151 Pfam Auxin responsive protein 66 139 IPR003676 GO:0009733
Ahy12g2295 151 PANTHER SMALL AUXIN-UP RNA-RELATED 2 149 - -
Ahy12g2295 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2295 Ahy-Chr12 110343601 110344239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2295 70 135 Calmodulin-binding Proteins AT3G43120 50.000 2.15e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2295 K14488 - rcu:8270593 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2295 12 110343601 110344239 Ahy2g1981 2 94498270 94499402 hybridization