Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2276 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCAACAGATCTGTTCTCACTGCTTCAGCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCATCACAAGAAGGAAAGTGGAGGAGAAGGGAAGAAGAAGAAGAAGAAGAAGAAGAGAATAAAGGCTATGTGGGCTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCTCCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGCTGGTGGTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAGCCTCAGAGAATCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGTGGGGCAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGCTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCGTAATGTTGATTTTAGTTCTTCAGGGTTTGGTGTTGTGGAGCAAGGAGGATTGGTTATGGACCCTTCTATGCCTGGGAATTACCCTGCTTTCCCATTCCTTGGGGCTGAGAATATGGAGAGTCACAATGCAAAGAATGGTTATGGTGTTTCTGAACCCATGTTTGCTTCCTGTAACAATCCTATGTTGGTGTCCTCGGCTCCGACTTCGGGTGTGTTCGGCTTTCAGCAGCCTGTGTTTGGAACCGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAGCATATTGTTTACTCTCAGCAACCGGCGAAGCGTGCTGCGGTCGGGCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTCGCCAGGAGGCAGCAACAGGCGCAGCTTCCATTGTTTCCTCATCATCTGCAGCATCAGCAGAAGGTGAGTTCAGCCGGAGACGAGGCAAGCAACCAGCTTCAGCAGACTATGTTTGATCAGCTATACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCCATTGGCAAGCCTTTTCAGAGGGCTGCCCTCTACATGAAGGAGGCATTGCAACTACTGCTCCATTCAAACATTCCCAATTTCATGCCTTTCTCGCCCATCGGCTTCATATTCAAGATTGGAGCTTACAAATCATTCTCAGAGATCTCACCTGTTCTCCAGTTTGCAAACTTCACTTCCAATCAAGTCCTCATCGAAGCTGTAGAACGGTTCGATCGAATTCACATTATTGACTTTGATATTGGGTTTGGAGTGCAGTGGTCTTCCTTTATGCAAGAGCTTGCCTTGAGAAATAGCAATGCATCTTCTCTTAAAGTTACTGCCATAGTTTCGCCTTCGAATTGTGACGAGGTTGAGCTCAATTTCACAAGAGAGAATTTAAGTCAGTATGCAAAAGACATCAACTTATCATTTGAGCTCAATATCTTGAACATTGAATCATTGAGCTCTCCTTCCTTTCCACTGGCAAGTCAGTTCTTCGATAGCGAGGCAGTTGCTGTAAATATGCCGCTTTCTTGTTTCACTCATCATCCGTCGCTGGTTCCATCTGTCCTTCATTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGACCGAAATTGTGACCGAATCGATGTGCCACTTCCAACCAAAGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAATCGCTTGACGCCGTGAATGTGAACCTCGACGTCCTCCAAAAGATTGAGAAGCATTTCATCCAACCATCCATTAGGAATGTGATCACAGGTCACCACCATTACCATTCACAAGAGAAGCTACCTCATTGGAGGAACCTCTTTGTTCAATCTGGATTCTCATCATTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCGGTGCGAGGGTTTCAGGTCGAGAGAAACCATTCGTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTGGTCTCCATTTCGAGTTGGAGATGCTAA 2208 0.4692 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLQHQQQLVNNHSIHQPPPPSQEGKWRRREEEEEEEEENKGYVGCTEPTSVLDSRRSQSPPSSSCTMSSSLGSSNNSTSKGSAAAGGGGGCSASAAALASENPPPPPEGSMEKCGGARMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSRNVDFSSSGFGVVEQGGLVMDPSMPGNYPAFPFLGAENMESHNAKNGYGVSEPMFASCNNPMLVSSAPTSGVFGFQQPVFGTVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHIVYSQQPAKRAAVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHLQHQQKVSSAGDEASNQLQQTMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLLHSNIPNFMPFSPIGFIFKIGAYKSFSEISPVLQFANFTSNQVLIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSNASSLKVTAIVSPSNCDEVELNFTRENLSQYAKDINLSFELNILNIESLSSPSFPLASQFFDSEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRNVITGHHHYHSQEKLPHWRNLFVQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVERNHSSLVLCWQRKDLVSISSWRC* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2276 735 ProSiteProfiles GRAS family profile. 366 734 IPR005202 -
Ahy12g2276 735 MobiDBLite consensus disorder prediction 81 114 - -
Ahy12g2276 735 Pfam GRAS domain family 377 734 IPR005202 -
Ahy12g2276 735 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 70 734 - -
Ahy12g2276 735 MobiDBLite consensus disorder prediction 42 149 - -
Ahy12g2276 735 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 734 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2276 Ahy-Chr12 109826068 109829167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2276 377 735 GRAS Transcription Factor Family AT4G00150 54.017 1.04e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy12g2276 GRAS 2.50E-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2276 - - aip:107625898 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2276 12 109826068 109829167 Ahy2g1963 2 94114425 94117527 hybridization