Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2230 ATGGATGTTGATTCGGAACCACTCAATTCAGAAGAGAACGTTGAAGATTGCTTGATGACCGGTGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATGATATTATAAATCAGACATTTGAAACATCGGATGCAGCTTATCACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTTCGGAGTTCGCAAGGGTGATATAGCGCGTGGAAAAGATGGAACACAACGCAGAAGGCGATTTTTTTGCAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAGAGGGAGCATAAAGCGCTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGCTTGGTACACCTAATTCCAAACCACCGTGGGATGAACGAGGCTCAAAAAACTCAGGCAAACACCATGCACAATAATGGTCTTTCAAGCTCTAAGATAATGGGACTAATGGTAGGCCAAGCCGGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATGGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATCTATTTTGGGCAGATGGCATTTGTAGGGCGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCGGAAAAATAAGTACAGAAGACCGTTGGTTATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACGGCAACATATACGTGGTTGTTGCAAAACTTTCTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGATGGTGATGAGGCAATGAAGGCAGCAATTCAAGAAATCTTCCCAAATGCAACTCACCGATTATGTGGTTGGCACATTTAG 1092 0.4441 MDVDSEPLNSEENVEDCLMTGVEENVNCTCDCGGSSSKCVVVTADDIINQTFETSDAAYHLYVRYARCVGFGVRKGDIARGKDGTQRRRRFFCNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDTKTSAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMNEAQKTQANTMHNNGLSSSKIMGLMVGQAGGYANVGFTKKDLDNHIERTRRAKLIGGDSNATISYLLGKADVDPMAMARYSATDESRLANLFWADGICRADYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTATYTWLLQNFLDVMLNKSPSVVVTDGDEAMKAAIQEIFPNATHRLCGWHI* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2230 363 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Ahy12g2230 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 363 IPR031052 GO:0006355
Ahy12g2230 363 PANTHER OS02G0262500 PROTEIN 46 363 - -
Ahy12g2230 363 Pfam MULE transposase domain 272 363 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2230 Ahy-Chr12 108648045 108649136 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g2230 MULE 9.20E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2230 - - ahf:112730498 753.436