Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2221 ATGGCAGGTGCAGTGTTAGGGGGTCCGAAGGTGGCAATTATTGAGGATCAGAGTGTGCCAGTACCGCAGGACAAACCACCTATTGAGATGGTTAAGCAGGCATTCTCCGGTGTTACTCTTGATCCAAGAATGTTGGAGAATTTACTGGTTTTTATTCCAAAGGTTGAATCACCGGTAGCCATTGCAGATGTGGATCCTACGACTCAGAATAACTGGTCAAAATCGAAGTGGTTAACAGGTTCCTGCCGTGCTCCAAGTGTTGAACCACTGTTGGGTCATCGATCGCAACTGCTTGGTAGAACTTGGTGTCCGTCGTCTCTGTCTTTGCAGCCGAGGTTCAGGAACCGACGATTCTTTGCCGTTCAGATGGAGGTGTCTTTAAGTGATGGGAATGGTGAGCTCCTGGGTACCGACAACGAGGCTGATGTGGAATCGAACCCAAAGGACATGTGTGGTCAGCATGTGGCAGACGAGGATTTGGGTGAATATGAAAATGTCGCTAGATTAGATGTGGAAGACATAAAGCGGATGCATTGGGATAGTGTTGATGCCGCTTATGAGTTTTACAGGAGGCTGGGAATGTGTCATGGATTCGGCGTCAGGAAGGGTGATTCAGGCAAAGACTGTAGCGGAAATTTGATTAGATATAGATTTTTTTGTAACAAGAAAGGGTTAAAGGATGGGAGACACAACGACCAAGTTGATAGACGGAGGGCACACAAACCTGAGACACGGACCAATTGTGAGGCTAAGCTCTCCATATACTTTGATAAAACTGAGCGTTGTTGGAAGGTGCGGAAAGTCGTGACAGAACATAATCACGACTTGACGCCCGCATCGATGGTCCATCTGATTGCCAACCATCGTGAAATGACCGATGCAACAAAGGCTCAGATTGATGGGTTGCGTGCTAGTGGCATTGCCACATCGAAGATTGTTGGATACATGGCTGGAATGGCTGGTGGGTACTCGTTGTTGGGTTTCTTGAAGAAGGACGTGTACAACTACACCGACAGAACCCGGTGCGCTAACATATCGAATGGCGATGCAAATGCAGCTGTTGTTTATTTGGAGGGAAAGGCTGGTTCGAATCCCATGTCAGTTGCTAGATATAGTGTAACAAAAGAAGAAACGCTGACAAATTTAATTTGGGCCGATGGAGCTAGAAGAGTTGATTATCAACATTTTGGAGATGTGCTGGCCTTCGACTCGACATATAAGAAAAACAAGTACAAAAAACCTCTTGTGATTTTTTCAGGGTCTAACAACCACAAGCAAACCACGATTTTTGGGTTTGGTCTATTATTTGATGAGTGTCAGTTCTTACAAGTGGATGTTAGAAAATCTGCTTGA 1353 0.4568 MAGAVLGGPKVAIIEDQSVPVPQDKPPIEMVKQAFSGVTLDPRMLENLLVFIPKVESPVAIADVDPTTQNNWSKSKWLTGSCRAPSVEPLLGHRSQLLGRTWCPSSLSLQPRFRNRRFFAVQMEVSLSDGNGELLGTDNEADVESNPKDMCGQHVADEDLGEYENVARLDVEDIKRMHWDSVDAAYEFYRRLGMCHGFGVRKGDSGKDCSGNLIRYRFFCNKKGLKDGRHNDQVDRRRAHKPETRTNCEAKLSIYFDKTERCWKVRKVVTEHNHDLTPASMVHLIANHREMTDATKAQIDGLRASGIATSKIVGYMAGMAGGYSLLGFLKKDVYNYTDRTRCANISNGDANAAVVYLEGKAGSNPMSVARYSVTKEETLTNLIWADGARRVDYQHFGDVLAFDSTYKKNKYKKPLVIFSGSNNHKQTTIFGFGLLFDECQFLQVDVRKSA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2221 450 Pfam MULE transposase domain 399 438 IPR018289 -
Ahy12g2221 450 PANTHER OS03G0181600 PROTEIN 174 439 - -
Ahy12g2221 450 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 174 439 IPR031052 GO:0006355
Ahy12g2221 450 Pfam FAR1 DNA-binding domain 187 277 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2221 Ahy-Chr12 108558958 108567010 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g2221 FAR1 1.90E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2221 - - ahf:112730492 923.694