Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2209 ATGTACAAGAAGGGGAGATTAGTTGGATGCAATAATAATGGAGCCATAGCTCAGTTTGGATATGTTGAGATTGATCCATCTGGAAGATATGGCCGTTTCAGAGATGTTTTGGGCAAAGGAGCAATGAAGGTAGTGTATAGGGCATTTGATGAAGTGCTTGGAATAGAAGTGGCTTGGAACCAAGTCAAACTTGGTGATGTTTTTCATTCACCAGACCAATTACAACGTCTTTATTCAGAGGTCCATCTTCTCAAGAACCTTGACCATGAATCAATCATGACCTTCCATGACTCTTGGATCGATGTCCACTCTAGATCCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTATAGAAAGAAGTACAAGAGAGTAGATATAAGAGCAATTAAGAATTGGGCAAGGCAGATTCTAAGAGGATTGGAGTATTTACACAGCCATGATCCACCAGTGATTCATAGAGACATCAAATGTGACAATATATTTGTGAATGGGCATTTGGGTCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCAATTCTTCGTGATAGTTCACAATATGCACACAGTGTCATTGGTACACCGGAATTTATGGCACCTGAATTGTATGAAGAGGAATACAATGAGCTTGTTGATGTCTATTCATTTGGGATGTGTATGATTGAGTTGTTCACTTCTGAGTTCCCATACAGTGAATGCTCCAACCCAGCTCAAATTTACAAGAAAGTTACTTCAGGGAAGCTACCAAATGCCTATTACAGAATCAATGATTTGGAGGCCCAAAGATTTATTGGAAAGTGTTTGGCAAATGTCTCAGACAGGCTGCCAGCAAAGGACCTCTTGTTGGACCCATTTTTGGAAATGGACCAACTTCACTCACCACTACAAAGCCCAAGCCCAAGATCAAGCCCAACATTACTCAATTTCAATGCCAAAGAGAAGAAGAAACCTTCAATCATGACTGAAGAAACAAAGGGCACACACATGACAATAACAGGCTCCATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTTCAAATTTCCAACCAAAGTGGGAGCACAAGAAACATATACTTCCCATTTGACACCATAAATGACACAGCCATTGATGTGGCAATGGAGATGGTTAAAGAACTTGAAATTAGTGACTTGGAACCAATGGAGATTGCTGAAATGATAGAAGAAGAGGTATCAGCTTTGGTTCCAACATGGAGGGACTTGGGAAATTCTATTAAGTATCAAAGACAACATAGCTTTAACTATGAACAAGAAGAAGATGATTATGATGATGATGATGTTAGCAATAATCACAATCCTTTCTTCTCATTGTCTTCTCCCTCTTCCTCTCATGGTTCTCTCCCAATGCTTTACCAAAATATTACACAAATTGGTGGAAACCATTACCCACTTTCTCATGATTTGCCTCAAGATGATCCCCTTATGAATGATGATGCAAGCTCTCAAAGTTCTTTGGATTCCTTCAAGTATTCCCATTTACACTACTTGGACGCAAGCAATGAAGATAATGATCATGTTTCAACTCTTCTAACTATCAACAACAAGTGCACAAGATTTTGCCCTAGAGAAGAGGTGGTGGAGGCTGATTTCACCAACCAGTTTTGCAACATGAGAATGGATCCTTGCAGGTACCATAAGCCTATGGTAGGGCATGGATTCCCAAGACTAACTAGGATTCAATCATATGTTGATGTGAGGAGGCAACAAATACAGACATCATTGGTGGAGGAGATACATAAAAGAAGGATGTTCAAGACTGTTAATGCCATTGAGAACATTGGATTTCAGAATCCCAAATGA 1833 0.3999 MYKKGRLVGCNNNGAIAQFGYVEIDPSGRYGRFRDVLGKGAMKVVYRAFDEVLGIEVAWNQVKLGDVFHSPDQLQRLYSEVHLLKNLDHESIMTFHDSWIDVHSRSFNFITELFTSGTLREYRKKYKRVDIRAIKNWARQILRGLEYLHSHDPPVIHRDIKCDNIFVNGHLGQVKIGDLGLAAILRDSSQYAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPNAYYRINDLEAQRFIGKCLANVSDRLPAKDLLLDPFLEMDQLHSPLQSPSPRSSPTLLNFNAKEKKKPSIMTEETKGTHMTITGSMNEEDDTVFLKVQISNQSGSTRNIYFPFDTINDTAIDVAMEMVKELEISDLEPMEIAEMIEEEVSALVPTWRDLGNSIKYQRQHSFNYEQEEDDYDDDDVSNNHNPFFSLSSPSSSHGSLPMLYQNITQIGGNHYPLSHDLPQDDPLMNDDASSQSSLDSFKYSHLHYLDASNEDNDHVSTLLTINNKCTRFCPREEVVEADFTNQFCNMRMDPCRYHKPMVGHGFPRLTRIQSYVDVRRQQIQTSLVEEIHKRRMFKTVNAIENIGFQNPK* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2209 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 11 609 - -
Ahy12g2209 610 SMART serkin_6 31 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2209 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Ahy12g2209 610 CDD STKc_WNK 29 290 - -
Ahy12g2209 610 ProSiteProfiles Protein kinase domain profile. 31 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2209 610 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Ahy12g2209 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 609 - -
Ahy12g2209 610 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Ahy12g2209 610 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2209 610 SUPERFAMILY Protein kinase-like (PK-like) 33 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2209 Ahy-Chr12 108279211 108286358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2209 19 434 MAP Kinase Kinase Kinase AT3G51630 67.064 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy12g2209 Pkinase 2.40E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2209 K08867 - gmx:100816187 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2209 12 108279211 108286358 Ahy12g2209 12 108279211 108286358 ECH
Ahy12g2209 12 108279211 108286358 Ahy2g1918 2 93047366 93054458 hybridization
Ahy14g2112 14 118913358 118918177 Ahy12g2209 12 108279211 108286358 PCT
Ahy4g1833 4 108329952 108335873 Ahy12g2209 12 108279211 108286358 PCT
Ahy12g2209 12 108279211 108286358 Ahy14g2112 14 118913358 118918177 PCT
Ahy12g2209 12 108279211 108286358 Ahy4g1833 4 108329952 108335873 PCT