Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2208 ATGCCAAACCTTTTTTTCTTCTATTGTGGACCCCAAGGCCTATACCACCAATTCCAAAAGCCTCTCTTTCCCTATATTATTTCTCTCTCACACAAACACAAAGAAAGGAAGAAAAAAGACCCAAAGTGTGTCAAGGCAGACACACTCATAGAGTGTTCTTTTTTGTTGTCCCATCCCCAACACAAAACACTCACAAAGGAGAGAATGGGAAATTACAAGTTTAAGCTTTCAGATATGATCCCAAATGCTTGGTTTTACAAACTTAGAGATAATATGTCTAAGGGAAGAAAACAAACCACCACCAAAAAGAAAAACCACCACCAACCACCACCACCATCAACCACCACCGCCGCCGCACATTCACCAAAACAACAAAAGCAACAACCCCATTTCCCCCACCACCATTGCACCCCAAGAAAATCTTACTACTTCACAAGGGAGCTCAATTACCAAAATAACCCCAAAGATTCACCACCACAAAGAAAATCTTCATCATCAAAACAACAAAGAGAGAGAAGAATTAGGAAAAGAAGAACAACAACATCATCATCATCGTCATCACCAAAGTTAGTTACTTCCTCCTCCTCTGTCTCTTCTGCTGCTAATTGTAGCTGCAGAGCAACAACAACCACACTCATTGAATCTGTTTGGACCAATAACAAATCAGATTCTCCACCTTATGATGACCAAGAATATTCATCAACACCTCCATTTCATGAAGATTCACCAAAAGAAGATTCCCCTAACAACAATGAACCAAATTTCAGAACAGACCATGTTCTTCTTCCAACCACCACCACCACAACAACAACAGAGTCTTCATCATTTGATGAAATGATTTCTTTTTCCAACACCACCAACAGTGACATAGTCATAGATGTGGACAAGAATTCACTTGTTTCAACAAGAAAAAAACACTATCATCATCATAAATTTGATGACTCATTTTCTGAGCTTGAGTCGTTGCCTCCAATCATAACCAAACCAAGAACAACCACCATGGCTGAAGAACAAAAAACCATGAAGGTTAAGAAGATTGTGAAGGAACAAGAACAAGAACAGAGGAAGAAGAACAACCCTACTACTAACTATGTTAGAGGATTCTCTCTGAATAATTCACCAGGTATGAAGGTTAAGATCAATTCACCAAAGCTAATGAACAAGCTCAATAACAATAATAACAACAATAGTAATGGCCGGAGAAGCGTGTCGTCGAGCTCCGGCTGCCGGAGAAGCATCTCCGGCAGCTTTGCTGTAGTGAAGTCATCCTTGAATCCAATGAAGGATTTCAGAGAATCAATGGTGGAGATGATTGTGGAGAACAACATAAGGAACTCAAAGGACTTGGAGGATCTTCTTGCTTGCTACCTCTCTCTCAACTCAGATGAGTATCATGAACTCATCATCAAGGTCTTCAAGCAAATTTGGTTTGATTTCACACAAACAAGGTAG 1452 0.3994 MPNLFFFYCGPQGLYHQFQKPLFPYIISLSHKHKERKKKDPKCVKADTLIECSFLLSHPQHKTLTKERMGNYKFKLSDMIPNAWFYKLRDNMSKGRKQTTTKKKNHHQPPPPSTTTAAAHSPKQQKQQPHFPHHHCTPRKSYYFTRELNYQNNPKDSPPQRKSSSSKQQRERRIRKRRTTTSSSSSSPKLVTSSSSVSSAANCSCRATTTTLIESVWTNNKSDSPPYDDQEYSSTPPFHEDSPKEDSPNNNEPNFRTDHVLLPTTTTTTTTESSSFDEMISFSNTTNSDIVIDVDKNSLVSTRKKHYHHHKFDDSFSELESLPPIITKPRTTTMAEEQKTMKVKKIVKEQEQEQRKKNNPTTNYVRGFSLNNSPGMKVKINSPKLMNKLNNNNNNNSNGRRSVSSSSGCRRSISGSFAVVKSSLNPMKDFRESMVEMIVENNIRNSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDFTQTR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2208 483 ProSiteProfiles OVATE domain profile. 419 478 IPR006458 -
Ahy12g2208 483 MobiDBLite consensus disorder prediction 349 370 - -
Ahy12g2208 483 MobiDBLite consensus disorder prediction 386 410 - -
Ahy12g2208 483 Pfam DNA-binding domain 69 106 IPR025830 GO:0003677
Ahy12g2208 483 MobiDBLite consensus disorder prediction 94 203 - -
Ahy12g2208 483 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 71 482 - -
Ahy12g2208 483 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 71 482 IPR038933 GO:0045892
Ahy12g2208 483 MobiDBLite consensus disorder prediction 218 260 - -
Ahy12g2208 483 MobiDBLite consensus disorder prediction 144 164 - -
Ahy12g2208 483 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 417 478 IPR006458 -
Ahy12g2208 483 Pfam Transcriptional repressor, ovate 423 478 IPR006458 -
Ahy12g2208 483 MobiDBLite consensus disorder prediction 105 126 - -
Ahy12g2208 483 MobiDBLite consensus disorder prediction 180 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2208 Ahy-Chr12 108221578 108223357 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy12g2208 Ovate 1.60E-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2208 - - ahf:112728150 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2208 12 108221578 108223357 Ahy12g2208 12 108221578 108223357 ECH
Ahy12g2208 12 108221578 108223357 Ahy2g1917 2 93012405 93014077 hybridization