Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2186 ATGCCTTTGGATGAAGAAGTGAAAGAAAACAAAGGGATTCAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAGCATATATGTCTTCAAGGGGGAGAAAAAAAGCAGCTATGCAACGCATGTTGCAACAGCTTCGAACCGCCACAAATTCCAGTGCTATGAACAAAGCCTCTATTATTGTTGATGCCACCAAATACATAGAAGAGTTGAAGCAAAAAGTGGAGGGAATTAACTCAGAGCTAGGAACCGTTGGATCTTCATCATCAACCTCCCAAGATGAATTACCAATGGTGACGGTAGAAACCCTAGAAAGGGGTTTTCTTATTAATGTGTTTTCAGAAAGGAATTGCCCCGGTATGCTTGTGGCAATACTTGAGGCCTTTGAAGAACTGGGTCTTGATGTTCTTGACGCTAGGGTTTCTTGTGAAGACAATTTCCAGCTTGAAGCTGTGGGAGGAGAAGGTCAAGATCAGGAGAGCATCGATGCGCAAGTGGTAAAACAAGCAGTGTTGCAAGCAATCAATAACATGAATTAA 549 0.4098 MPLDEEVKENKGIQERKKERKKERKKEREAYMSSRGRKKAAMQRMLQQLRTATNSSAMNKASIIVDATKYIEELKQKVEGINSELGTVGSSSSTSQDELPMVTVETLERGFLINVFSERNCPGMLVAILEAFEELGLDVLDARVSCEDNFQLEAVGGEGQDQESIDAQVVKQAVLQAINNMN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2186 182 MobiDBLite consensus disorder prediction 1 35 - -
Ahy12g2186 182 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 32 182 - -
Ahy12g2186 182 Coils Coil 3 23 - -
Ahy12g2186 182 Coils Coil 64 84 - -
Ahy12g2186 182 CDD ACT_UUR-ACR-like 122 178 - -
Ahy12g2186 182 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 32 182 - -
Ahy12g2186 182 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2186 Ahy-Chr12 107893135 107896036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2186 32 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 28.931 1.02e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2186 - - aip:107628501 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2186 12 107893135 107896036 Ahy17g1350 17 22793128 22797203 ECH
Ahy12g2186 12 107893135 107896036 Ahy20g1270 20 25048165 25050837 ECH
Ahy12g2186 12 107893135 107896036 Ahy12g2186 12 107893135 107896036 ECH
Ahy12g2186 12 107893135 107896036 Ahy11g0297 11 3323198 3326553 ECH