Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2175 ATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCAATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCAGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAAAATTTGCACGACATAGGCATCAGGACCTGTGACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAAGTGAAGGGTGGTGATGCAAATGTTGCAATAAGCTACCTGAGAGGTAAAGCTGGGAATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTTTGGGCTGATGGGACTAGCCCTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCAACTTACAATAGGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCATATTTGGATGTGGTCTTATTGTTAATAAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAATAAACACCCTATGGCAGTTGTCACCGACGGAGGTCTTTCAATGAGAGAAGGCATTAAATAG 903 0.4164 MQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRNSDGCVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCDILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVKGGDANVAISYLRGKAGNDSYFFGKYTLSNENRLENLFWADGTSPIDYECFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVIFGCGLIVNKDIGSYKWLLETFLEAMGNKHPMAVVTDGGLSMREGIK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2175 300 Pfam MULE transposase domain 224 299 IPR018289 -
Ahy12g2175 300 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 300 IPR031052 GO:0006355
Ahy12g2175 300 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Ahy12g2175 300 PANTHER OS02G0262500 PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2175 Ahy-Chr12 107511548 107512450 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g2175 FAR1 8.10E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2175 - - aip:107620373 561.607