Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2166 ATGTCTGAACTTCTCGGAGGCGACACGCTAAACCAGCTTTTACCATTGAGGAGGCAAGAGACAGAGAGATTCTTGAGGTTATTGCTTAAGAGAGGGATGGCTGGTGAGGCTGTTGATGTTGGAGGAGAACTCTTGAAGCTTTCGAATAACGTTATCTCGAGGATGATCATGAGCAAGACCCATATGGAAAATGATGGTGAGGCTGAGGAGGTACGGAAGCTGGTGCAGGACACGGCAGAACTTACCGGGAAGTTTAATGCTTCGGATTTCATTTGGTTCCTCAAGAACTGGGACTTGCAAGGTATCAGAAAAAGGGTTGAGGAGATTCGGAACAGGTTTGATTCCTTGATGGAGAGAGTGATCAAGGAACATCAAGAGGAAAGGATGAAGAGGAAGAAGGAAGGAGAAGATGGTGAAATCAAAGACCTACTTGATATATTATTGGACATACATGAAGATGATAACTCTGAGATACATTTGACTAAAGAGAACATCAAGGCCTTCATCTTGGACATATTTATAGCAGGAACAGACACTTCAGCATTAACTATAGAATGGGGTCTAGCTGAGTTGATAAATCATCCTCAAGTGATGGAGAGGGCAAGACAAGAGATTAAAACTGTGGTTGGAAATAATAGGATAGCAGAAGAATCAGACATTGTCAACCTTCCTTATCTTCAAGCAATACTCAAAGAAACACTGAGAATTCACCCAACAGGTCCAATGAAAGTTAGAGAGTTTGTTATAGCCTTTAGTCTCATTGACCACAACGGAAATAGAAGGCCATCTGCATGTCCACACACATAA 807 0.4213 MSELLGGDTLNQLLPLRRQETERFLRLLLKRGMAGEAVDVGGELLKLSNNVISRMIMSKTHMENDGEAEEVRKLVQDTAELTGKFNASDFIWFLKNWDLQGIRKRVEEIRNRFDSLMERVIKEHQEERMKRKKEGEDGEIKDLLDILLDIHEDDNSEIHLTKENIKAFILDIFIAGTDTSALTIEWGLAELINHPQVMERARQEIKTVVGNNRIAEESDIVNLPYLQAILKETLRIHPTGPMKVREFVIAFSLIDHNGNRRPSACPHT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2166 268 SUPERFAMILY Cytochrome P450 3 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 Gene3D Cytochrome P450 2 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 Pfam Cytochrome P450 8 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 246 - -
Ahy12g2166 268 Coils Coil 99 119 - -
Ahy12g2166 268 PRINTS E-class P450 group I signature 47 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PRINTS E-class P450 group I signature 184 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PRINTS E-class P450 group I signature 164 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PRINTS E-class P450 group I signature 227 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PRINTS P450 superfamily signature 228 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PRINTS P450 superfamily signature 175 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy12g2166 268 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2166 Ahy-Chr12 107279613 107280510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2166 1 246 Cytochrome P450 AT5G06900 48.387 1.59e-79 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2166 K24188 - aip:107625838 523.857