Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2163 ATGCGAGCATTGAACGTGACAATGGAAGAAGTATGTGATGCACTTTATGAAGGAAATGAGTTGCCTGCTGAGTTCCTCCAAACCTTGCTGAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGTGAGCTATCTCAACTTGGCCCTGCTGATCAGTTCTTGAAAGCAATGGTTGACATGCCATTTGCTTTTAAGCGAATGGAAGCACTTCTTTTCATGAGTACACTTAAAGAGGAGCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACACTGAATGTGAACTTCCTCGGGAGGATAGTGCTGGCTATTCCTTGACTGCAAAGCATGCATTACTGGATGGAGAGGAGAACCTGAAGAAGGTTGATAGCTTCTCAAGGTGA 438 0.4406 MRALNVTMEEVCDALYEGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDMPFAFKRMEALLFMSTLKEELNSTIESFAVLESTDAQSQHAPRSDTECELPREDSAGYSLTAKHALLDGEENLKKVDSFSR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2163 145 PANTHER FORMIN-LIKE PROTEIN 1 97 - -
Ahy12g2163 145 Gene3D Formin, FH2 domain 1 105 IPR042201 -
Ahy12g2163 145 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 145 IPR015425 -
Ahy12g2163 145 PANTHER FORMIN-RELATED 1 97 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy12g2163 145 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 96 - -
Ahy12g2163 145 Pfam Formin Homology 2 Domain 1 97 IPR015425 -
Ahy12g2163 145 MobiDBLite consensus disorder prediction 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2163 Ahy-Chr12 107253406 107256238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2163 1 96 FH2 protein (formin) Gene Family AT5G54650 70.833 2.97e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2163 - - ahf:112728110 285.034