Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2149 ATGGAGAGGAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATCGATATTCTTGATGATGGCTACGGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCAGCACGCGGCAGCGCAGGTTACAACATGAACAGAAACTCTCTAAATAGAAACAATAGCAGTGCACCGGCGGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACGAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTCTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATTCGCAACTTTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTTGAGTCATTTCTTTCAAAGAACTAA 630 0.4508 MERKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDGYGWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNRNNSSAPAAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNSQLSDGVYIKAKDERKDDSFLESFLSKN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2149 209 SMART WRKY_cls 36 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2149 209 MobiDBLite consensus disorder prediction 91 121 - -
Ahy12g2149 209 ProSiteProfiles WRKY domain profile. 31 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2149 209 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 205 IPR044810 GO:0003700
Ahy12g2149 209 Gene3D WRKY domain 21 97 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2149 209 MobiDBLite consensus disorder prediction 1 21 - -
Ahy12g2149 209 SUPERFAMILY WRKY DNA-binding domain 28 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2149 209 MobiDBLite consensus disorder prediction 1 17 - -
Ahy12g2149 209 PANTHER OS04G0471700 PROTEIN 6 205 - -
Ahy12g2149 209 Pfam WRKY DNA -binding domain 37 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2149 209 MobiDBLite consensus disorder prediction 103 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2149 Ahy-Chr12 107035672 107040916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2149 37 96 WRKY Transcription Factor Family AT2G38470 55.738 3.95e-16 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy12g2149 WRKY 8.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2149 K13424 - adu:107472292 382.874