Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2143 ATGGTCAATATTCAAGAAAATGAATCTTCAACTTCTCAGAAGCAACTTCCTAACACATGCATGCATGCTCTTACTTCAATTCACATATATATATGCTCACAAAATATGCATCACTTTCTCAAAAAAGAAAGGAACATGTCTTTCACTACTTTCAGTGGCTTACTTTCAAGAAGGTACAACAACATCAGCATGGTTGATAATTGTTGGGAAACTTCTATACCTAGAACTGGTAGTGATGATAATCATGGTGAATTTTTTTCATCAATAATTTACCCTTCTTACTCTGATTTCCCACCTGGTTTCAATCCCAATGAGTTCTTGGATGCATTTCTTTCTGAATCAAATAGTTTAAACTGGAGAAACAGTTCAAGTGAGAATCAACAAAGTAAGGAAGAGGATGAAAAGTACTACTCTGACCCCTCTATTGATGTGTCTCTCTTACAATCCTCCTCAAACATTTTTGAAGAGGGAGACCCACAAAGAAAGCAGGACACATTTACAATCCTTGAATCTGGCATGCTTGTTGATTTTTCATCGCCGATGACGAATACAACAAATTTTCAAGATCCGTATCTCCGCAACTTCTCTGAAATGGCCTTAGCCGTTCCCGAAATACATAGCACTTTAGCTCCTCAACTAAATTGTCATAAATCTATTAATGAAGATGAGGACGGAGATGGATACAATTGGAGGAAATATGGAGAGAAACGGACGAAAGGAGGCGAAAATCCCCGGAGTTATTATAGGTGCGCAGAACCAAATTGCACGATGAAGAAGAAAGTTGGGAGAAACTTGGATGGAAAAATCATTGCCATTATGTACAAGGGAAATCACAACCATCCCAAGCCTTCTAAACCTGTTGGAAGTGCAAATTTTCCATTAGTTAATGAACTTTATGCATCATCATACACTGACTCGGTGAATTTGAATCGACAATCTGTTGGAGGAGGTGTTGAAAATCAACTTGGAGCACACACCAAAAGATTGAAAGGAGGGAATGGAATCTATAGCTATTTGTTTCCGAGTGGGGGCAAAGCTATAAAGGAACCCAGAGTTGTAGTTCAAACTACAACTGAAATTGACATTCTTGACGATGGCTATAAGTGGAGGAAATATGGCCAGAAAGTTGTTAAGGGAAACCCAAACCCAAGGAACTACTATAAGTGTGTGAGTCCAGGTTGTAACGTGAAGAAACATGTGGAGAGAGCTGCAGATGACATAAAGTCTGTGATGACAACCTATGAAGGCAAACACAACCATGATGTTCCTCAAGAAAGATCATCCTTTGCATCTCGCATAGCATCACTCACCAACAACTTTGCAACCCCATCATCATCATCATCACTTCCTCTTCATGACACAAGCCTATCACTATCTTCACCAAGGGCCAACAATGAAAATCAAGCAAGTCAAGAACTTACTACTCTTCCCTTCATTGTTGGAATTCCAAATTTCGGTAGGTCATTGATTGGTACTTCATATGCCAATGAGGGACCAAGCTCAAACAATGAAGAGAAGAAGGATTAG 1527 0.3923 MVNIQENESSTSQKQLPNTCMHALTSIHIYICSQNMHHFLKKERNMSFTTFSGLLSRRYNNISMVDNCWETSIPRTGSDDNHGEFFSSIIYPSYSDFPPGFNPNEFLDAFLSESNSLNWRNSSSENQQSKEEDEKYYSDPSIDVSLLQSSSNIFEEGDPQRKQDTFTILESGMLVDFSSPMTNTTNFQDPYLRNFSEMALAVPEIHSTLAPQLNCHKSINEDEDGDGYNWRKYGEKRTKGGENPRSYYRCAEPNCTMKKKVGRNLDGKIIAIMYKGNHNHPKPSKPVGSANFPLVNELYASSYTDSVNLNRQSVGGGVENQLGAHTKRLKGGNGIYSYLFPSGGKAIKEPRVVVQTTTEIDILDDGYKWRKYGQKVVKGNPNPRNYYKCVSPGCNVKKHVERAADDIKSVMTTYEGKHNHDVPQERSSFASRIASLTNNFATPSSSSSLPLHDTSLSLSSPRANNENQASQELTTLPFIVGIPNFGRSLIGTSYANEGPSSNNEEKKD* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2143 508 SUPERFAMILY WRKY DNA-binding domain 355 423 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 SUPERFAMILY WRKY DNA-binding domain 222 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 MobiDBLite consensus disorder prediction 119 138 - -
Ahy12g2143 508 Gene3D WRKY domain 348 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 Gene3D WRKY domain 211 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 ProSiteProfiles WRKY domain profile. 219 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 ProSiteProfiles WRKY domain profile. 358 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 452 IPR044810 GO:0003700
Ahy12g2143 508 MobiDBLite consensus disorder prediction 441 469 - -
Ahy12g2143 508 Pfam WRKY DNA -binding domain 226 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 Pfam WRKY DNA -binding domain 364 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 87 452 - -
Ahy12g2143 508 SMART WRKY_cls 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g2143 508 SMART WRKY_cls 363 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2143 Ahy-Chr12 106870192 106876334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2143 226 457 WRKY Transcription Factor Family AT2G38470 45.620 1.20e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy12g2143 WRKY 3.00E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2143 K13424 - gmx:100127367 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2143 12 106870192 106876334 Ahy2g1879 2 92230595 92237665 hybridization