Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2140 ATGGGAAATGCTTGTACGTGTCAAGTTTCTATTGGACGAAAAGTGTATGATGCTGATGACTCTGATTCAAATAATTCAAATGATTATTTACCATATAGATATGGACATTGTGGAGCCAAGGTTATGTTAAGTGGATCCTCTAAATTTGTATCAATGTATTCCCAAAAGGGTCAAAAAGAAGTGAATCAAGATGCAATGACAGTTTGGGAGAACTTCACTGGAGAAAAAGACATGATATTTTGTGGTGTGTTCGATGGTCATGGTCCTCAAGGGCACAAATATGCACAAACCATATGCAATAATCTTCCTTCAAAACTCTCCACATCAATCAAAATGTCACAGCAAATTAGTAAGAGCCAACTTGGATTGGATATCAATGGTGATGAAAACCAAAACATGCCTTGTGTTTCATGGGAGGGAAGCTTTTTGAAGTCTTTTAGTGAAATGGATAGAGATCTTGCTCAGAACGTTTACATTGGTAGCTTTAGTGGCGGTAGCACTGCTGTCACTATAGTTAAGCAGGAAAATCAGTTGATAATTGGTAATTTAGGAGATTCTCGTGCAATTCTTTGCACAAAAACAGATGACAATTTTCGAATTCCTATTCAACTTACCGTTGACCTAAAACCAAATATTCCAAGTGAAGCTTCAAGAATAACTAAGTGTGGAGGCAGAATCTTTCCATCAAAAGATGATCCAAGTGGTATAAATAGAATATGGATGGCTGAAGAAGATTGTCCTGGCTTGGCTATGACAAGATCATTTGGAGATTTCTGCCTAAAAGATTATGGTCTCATCTCAGTTCCTGATGTAATCTATAGAAGAATTAACAAACAAGATGAATTTGTGGTTTTGGCCTCTGATGGAATATGGGATGTGCTAACAAATGAAGAAGTAATTAACATAATTAGTTCAGCAAGGAAGAGGTCAGAAGCAGCAAAAACATTAGTAAAGCATGCCCTTCAAGCCTGGAAAGTCAAGTGTCCTAATGCTGCAGTTGATGATTGTACAGCTATATGTTTGTTCTTGAATAATTAA 1038 0.3671 MGNACTCQVSIGRKVYDADDSDSNNSNDYLPYRYGHCGAKVMLSGSSKFVSMYSQKGQKEVNQDAMTVWENFTGEKDMIFCGVFDGHGPQGHKYAQTICNNLPSKLSTSIKMSQQISKSQLGLDINGDENQNMPCVSWEGSFLKSFSEMDRDLAQNVYIGSFSGGSTAVTIVKQENQLIIGNLGDSRAILCTKTDDNFRIPIQLTVDLKPNIPSEASRITKCGGRIFPSKDDPSGINRIWMAEEDCPGLAMTRSFGDFCLKDYGLISVPDVIYRRINKQDEFVVLASDGIWDVLTNEEVINIISSARKRSEAAKTLVKHALQAWKVKCPNAAVDDCTAICLFLNN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2140 345 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 345 - -
Ahy12g2140 345 SMART PP2C_4 43 341 IPR001932 -
Ahy12g2140 345 Pfam Protein phosphatase 2C 57 322 IPR001932 -
Ahy12g2140 345 PANTHER ALPHABET, ISOFORM E-RELATED 1 345 - -
Ahy12g2140 345 SUPERFAMILY PP2C-like 45 345 IPR036457 -
Ahy12g2140 345 Gene3D - 43 345 IPR036457 -
Ahy12g2140 345 CDD PP2Cc 49 343 IPR001932 -
Ahy12g2140 345 ProSiteProfiles PPM-type phosphatase domain profile. 49 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2140 Ahy-Chr12 106806266 106809888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2140 38 345 PP2C-type Phosphatase Gene Family AT5G01700 49.351 3.76e-110 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2140 - - cam:101501265 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2140 12 106806266 106809888 Ahy12g2140 12 106806266 106809888 ECH
Ahy12g2140 12 106806266 106809888 Ahy2g1876 2 92174650 92178134 hybridization