Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2131 ATGAAATCAAGCACACCATTGAAAGCCTTGAGTGGTAATAGTAGTAGTAGTGTTCATCATCATGACAATGATATTATTCCATTTCTTCATCATGAGTATGGTGGTAACATGATGAATAAGGTTACTACTAGTTATAGTTTTAATAACCCTTCTATGTGTCGATTAGGGTTTCCTTTAACAGCCATAGATAGGTTCCTATGTAGCCAACAACAAAGCCAAGTCCTTCATAGGAAACACCAACAACACAATGATGATGATGTTGCAAAGAATAATAATAATGTTAGTGTTTTTGATGAAGATTTCCACACTAGGTTTTCTAATTGTTATTATGGTGGTGCTTCAAATAACCCTTATTATAAGTTTGAGTGGCCTAATTGCACTACTCAAGAAGCAAGCCTTGTTGTTGATGATGATCATGATCATCACCTCTTAGCAATTAGTAGTGCTGATCAAGAAGAGGGTTTCAATTGGCTACAAAAATTCCTCACATTTTGTCACAATAAAGAAGATGTTCAAGCTTTAGGGGAAAATCACAAAATTAGGGGAAGGAACCCTAAGAAAGGTTCTTCTATATCCTTGATCAAAGGACAATGGACTCCTGAGGAAGACAGGAAATTGGAGAAGCTAGTGAAGCAACATGGTATAAGGAAGTGGTCACAAATAGCTGAGAAATTGGAGGGAAGGGTTGGGAAGCAGTGTAGAGAGAGGTGGCATAATCATCTCCGCCCTGATATCAAGAAAGATGGTTGGAGTGAAGAAGAAGAGAGGATTTTGGTAGAAACTCACATGAAAATCGGGAATCGTTGGGCTGAAATCGCGAAGCGAATACCCGGACGAACCGAAAACTCGATCAAAAACCATTGGAACGCAACAAAAAGAAGACAGAACTCAAGGAGAAAGAACAAGAAGCCATCATCATCATCAACCACCTCAAATAATAATGGCAAACCACAATCTTCAATTCTTCAAGACTACATTAGAAGCAAAACCCTAATTGGTACCAATAATATCACTGTTCCTATTACTACTACCACTACTAATTCAACACCAACTATTACTAGTGAATCTGAATCTATCACTAATAATAGTGATATTAATAATAATCCATATTATTCATCACCAACAATCATAGCTGAATCATCATATGATGATGAGTTACTCTTCATGCAACAACTTTTCAAAGAGAATAACCAAATTGTCAATGGAAATGCTGTTATTAAGAACCCTAACGATGAATGTGGTGATGGGTTTGTTCATTATTCCAATTATTATTATCCTCCAAATCCAGGGAACATGCACAACCCCATCATCAATTGA 1317 0.3675 MKSSTPLKALSGNSSSSVHHHDNDIIPFLHHEYGGNMMNKVTTSYSFNNPSMCRLGFPLTAIDRFLCSQQQSQVLHRKHQQHNDDDVAKNNNNVSVFDEDFHTRFSNCYYGGASNNPYYKFEWPNCTTQEASLVVDDDHDHHLLAISSADQEEGFNWLQKFLTFCHNKEDVQALGENHKIRGRNPKKGSSISLIKGQWTPEEDRKLEKLVKQHGIRKWSQIAEKLEGRVGKQCRERWHNHLRPDIKKDGWSEEEERILVETHMKIGNRWAEIAKRIPGRTENSIKNHWNATKRRQNSRRKNKKPSSSSTTSNNNGKPQSSILQDYIRSKTLIGTNNITVPITTTTTNSTPTITSESESITNNSDINNNPYYSSPTIIAESSYDDELLFMQQLFKENNQIVNGNAVIKNPNDECGDGFVHYSNYYYPPNPGNMHNPIIN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2131 438 SMART sant 194 243 IPR001005 -
Ahy12g2131 438 SMART sant 246 294 IPR001005 -
Ahy12g2131 438 MobiDBLite consensus disorder prediction 302 321 - -
Ahy12g2131 438 CDD SANT 198 241 IPR001005 -
Ahy12g2131 438 PANTHER MYB PROTEIN-RELATED 189 395 - -
Ahy12g2131 438 ProSiteProfiles Myb-like domain profile. 242 292 IPR001005 -
Ahy12g2131 438 MobiDBLite consensus disorder prediction 278 321 - -
Ahy12g2131 438 MobiDBLite consensus disorder prediction 347 366 - -
Ahy12g2131 438 SUPERFAMILY Homeodomain-like 192 288 IPR009057 -
Ahy12g2131 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 296 IPR017930 -
Ahy12g2131 438 Gene3D - 249 320 - -
Ahy12g2131 438 CDD SANT 250 292 IPR001005 -
Ahy12g2131 438 Pfam Myb-like DNA-binding domain 198 255 - -
Ahy12g2131 438 PANTHER MYB DOMAIN PROTEIN 64-RELATED 189 395 - -
Ahy12g2131 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 245 IPR017930 -
Ahy12g2131 438 Gene3D - 194 246 - -
Ahy12g2131 438 ProSiteProfiles Myb-like domain profile. 190 241 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2131 Ahy-Chr12 106620340 106623004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2131 186 436 MYB Transcription Factor Family AT5G58850 52.713 2.67e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy12g2131 Myb_DNA-bind_6 1.00E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2131 K09422 - gmx:100786295 299.286