Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2121 ATGGAAACCAATAGTTGGCATGTCAATGGTTTCCACGTTAAGGGTAGTAGTAAAGATTCAATCTTTTTGGCCATTTTCATGTTCATTCATGTTTTGGCTTCTACCATTGAACCTGTTGCATGCCACCTGTATGATGGAGTGATTGTGACACAATCAGATTACCAGGCCTTAACGGCCATCAAGCATGAGTTCATTGACCTCAAAGGGGTTCTGAGGAGCTGGAATGACAGTGGTATTGGTGCTTGTTCTGGTGGTTGGGCAGGTATCAAGTGTGTCAATGGTGAAGTCATTGCAATTCAGCTTCCATGGAGGGGTTTAGGCGGAAGAATCTCAGAGAAAATTGGTCAGCTTCAAGCACTCCGGAAGCTGAGTCTCCATGACAATGTTCTTGCTGGTTCTGTCCCTTTTTCTTTAGGATTCCTTCCAAATCTTAGAGGTGTTTATCTCTTCAATAACAAGCTTTCAGGTTCTATTCCTCCTTCTATTGGTAGTTGTCCAATGCTTCAGTCTTTTGATGTTAGCAATAACTCACTCACTGGTAACATCCCTGCTAGTTTGGTAAATTCAAGTAGGATATTCAGGATCAATTTGAGCTTCAACTCACTTACTGGTTCCATTCCTAGGAGTTTCACCATGTCTCAATCCCTTACTATTCTTGCTCTCCAACACAACAATCTATCTGGTTCTATACCAGATTCTTGGGGTGGAATGGGAAAGGGAAAGAGAGTTCCCCAACTTCAAGTTTTGACCCTTGATCACAACCTCATTTCTGGTTCCATTCCTGTTTCTCTGAGTAACATGGTTTTGCTTGAAAATGTTTCTTTGAGTCATAACCATATTGGAGGCTCTATTCCAAGTGAGCTAAGTGCACTTTCAAGGCTTCAAAATCTTGATCTTTCACACAATGCCATCAATGGAAGCTTCCCTGCTAGCTTCTCCAACCTTTCTTCTCTTGTTTCATTGAATTTAGAGGGTAATAAACTTGAGAGTCATATCCCTGATAATTTGGACAGGTTGCACAATCTTTCAATGCTTAACCTCAAGAACAATAAGTTTAATGGCCAAATCCCACCAACAATAGGGAATATCTCTGGCATTAGACAAATTGATGTGTCTGGGAACAAATTCATTGGAGAAATTCCAGACTCACTCACCAAACTAGCAAATCTCACTTCATTCAATGTATCTTACAACAATCTCTCTGGTCATGTCCCTTCACTCCTCACCAAAAGATTCAACTCTAGCTCCTTTGTTGGGAATCTAGAACTATGTGGTTACCTATCAAAACCATGCACTTCACCTCCACCTTCAAATCTTCCAGTCCAAACACCAAACCCTTCTCCAAAGCCACATCATCACAGAAAGCTAAGTACCAAGGACATAATCCTCATTGTAGCAGGTATTCTCCTGTTGATTCTGTTACTCCTGTGCTGCTTTTTGCTATGTTGTTTGATCAGGAAAAGGGCTGCTTCAAGTAGAAAGGGTGCAAAGGCAACATCCAAGGCTTCAGCATCTGCAAGGAGTGTTGAAAAAGGTGGTGCTGGTGGTGAAGTTGAGTCAGGAGGAGAAGCTGGTGGAAAACTTGTTCACTTTGATGGTCCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCAACTGCTGAGATAATGGGAAAGAGTGCATATGGAACTGCATACAAGGCCACATTGGAGGATGGTAACCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGAGTACAAAAGGGCCCAAGGAGTTTGAGGCTGAGGTTGCTTCACTTGGCAAAATCAGACACCCAAATCTCTTAGCACTCAGAGCTTATTATTTGGGTCCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCAAAAGGAAGCTTAGCATCATTCCTTCATGCTCGTGGGCCGGAAATAGTGATTGATTGGCCGACAAGGATGAAGATAGCAATCGGAGTCACACGCGGCTTAAGCTACCTCCACAACCAAGAGAGCATAGTCCATGGCAATCTCACCTCAGGGAACATACTCTTAGATGAGCAAACCAATGCACACATAACAGATTTTGGACTGTCCAGGCTAATGACAACCTCGGCGAACACTAACATCATTGCAACAGCAGGAAGTCTAGGATACAATGCACCAGAGATCTCAAAAACAAAGAAACCAAACATGAAATCCGACGTATACAGCCTTGGAGTGATCATCTTGGAGCTCCTAACTGGGAAGCCACCTGGGGAACCAACCAATGGAATGGACTTGCCACAATGGGTGGCTTCTATAGTTAAAGAAGAGTGGACTAATGAAGTTTTTGACTTGGAGCTCATGACGGATGCACCAGCCATAGGTGATGAGCTTCTCAACACATTGAAGCTTGCCCTTCATTGTGTTGATCCTTCACCAGCTGCTAGGCCTGAAGCTCAGCAAGTTCTTCAGCAATTGGAAGAAATCAAGCCAGATTTGGCTGCTGGTGATGATGATGATGACGGAACTCTCAAGACTGCTGAATAA 2505 0.4315 METNSWHVNGFHVKGSSKDSIFLAIFMFIHVLASTIEPVACHLYDGVIVTQSDYQALTAIKHEFIDLKGVLRSWNDSGIGACSGGWAGIKCVNGEVIAIQLPWRGLGGRISEKIGQLQALRKLSLHDNVLAGSVPFSLGFLPNLRGVYLFNNKLSGSIPPSIGSCPMLQSFDVSNNSLTGNIPASLVNSSRIFRINLSFNSLTGSIPRSFTMSQSLTILALQHNNLSGSIPDSWGGMGKGKRVPQLQVLTLDHNLISGSIPVSLSNMVLLENVSLSHNHIGGSIPSELSALSRLQNLDLSHNAINGSFPASFSNLSSLVSLNLEGNKLESHIPDNLDRLHNLSMLNLKNNKFNGQIPPTIGNISGIRQIDVSGNKFIGEIPDSLTKLANLTSFNVSYNNLSGHVPSLLTKRFNSSSFVGNLELCGYLSKPCTSPPPSNLPVQTPNPSPKPHHHRKLSTKDIILIVAGILLLILLLLCCFLLCCLIRKRAASSRKGAKATSKASASARSVEKGGAGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKSTKGPKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPEIVIDWPTRMKIAIGVTRGLSYLHNQESIVHGNLTSGNILLDEQTNAHITDFGLSRLMTTSANTNIIATAGSLGYNAPEISKTKKPNMKSDVYSLGVIILELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMTDAPAIGDELLNTLKLALHCVDPSPAARPEAQQVLQQLEEIKPDLAAGDDDDDGTLKTAE* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2121 834 Pfam Leucine rich repeat 292 352 IPR001611 GO:0005515
Ahy12g2121 834 SUPERFAMILY Protein kinase-like (PK-like) 548 817 IPR011009 -
Ahy12g2121 834 ProSiteProfiles Protein kinase domain profile. 544 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2121 834 SMART LRR_typ_2 243 267 IPR003591 -
Ahy12g2121 834 SMART LRR_typ_2 141 165 IPR003591 -
Ahy12g2121 834 SMART LRR_typ_2 315 339 IPR003591 -
Ahy12g2121 834 SMART LRR_typ_2 117 140 IPR003591 -
Ahy12g2121 834 SMART LRR_typ_2 291 314 IPR003591 -
Ahy12g2121 834 SMART LRR_typ_2 387 410 IPR003591 -
Ahy12g2121 834 MobiDBLite consensus disorder prediction 813 834 - -
Ahy12g2121 834 Gene3D Phosphorylase Kinase; domain 1 550 621 - -
Ahy12g2121 834 SUPERFAMILY L domain-like 87 433 - -
Ahy12g2121 834 Pfam Leucine rich repeat N-terminal domain 51 91 IPR013210 -
Ahy12g2121 834 Gene3D Transferase(Phosphotransferase) domain 1 622 829 - -
Ahy12g2121 834 Pfam Protein tyrosine and serine/threonine kinase 548 812 IPR001245 GO:0004672|GO:0006468
Ahy12g2121 834 CDD STKc_IRAK 550 815 - -
Ahy12g2121 834 MobiDBLite consensus disorder prediction 496 521 - -
Ahy12g2121 834 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 16 821 - -
Ahy12g2121 834 Gene3D Ribonuclease Inhibitor 48 241 IPR032675 -
Ahy12g2121 834 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 16 821 - -
Ahy12g2121 834 Gene3D Ribonuclease Inhibitor 242 436 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2121 Ahy-Chr12 106366584 106369824 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2121 42 817 Receptor kinase-like Gene Family AT3G51740 68.462 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy12g2121 PK_Tyr_Ser-Thr 1.70E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2121 - - aip:107625805 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2121 12 106366584 106369824 Ahy12g2121 12 106366584 106369824 ECH
Ahy12g2121 12 106366584 106369824 Ahy2g1853 2 91792639 91795821 hybridization