Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2066 ATGAACCTCACTCTCTATCACTTAGGAATGGAGGATTCAAAATCATTTGGAATAAAGCAAGAAGGGTATCATAATCCTTCATCCATCATGAAAACAGAGGAATTCTCGTTCCGACGCAGCAAAGTGAAGCAAGCATTGATGATATTTCGGAACTTGTTTTCAAAACTCTTTAGCGAGTACAAAACAGATCACTATGATAATGTGAAAGCAAAATTTAAAGCTTTGAGTGATGCTGCAATGTTGATGCAGAGGAAGCATCAATGGGTGAACTGCCAAAAACGGGTGGGACATGTCCCTGGGATTGAAGTTGGAGACCGATTTCAGTATAGGAATGAACTCAATGTCGTCGGCCTCCATCGCCAGTTTGTCAATGGAATCGATTACGTGGGTAAGGGCAAGAACTCTTTAGCCACAAGCATTGTTGTAACCAATCGCTACGATAATGCTAGAAATCATGGTGGTTCATTGGTTTATAGTGGTCAGGGATGGAATCCTAATGTGAAAGGTGGATCTATGCCCCGTGATCAAAAGTTGGCTGGCGGAAATCTTGCTTTGAAGAATAGCATGGATGCTAAGAGTCCTGTGCGGGTTATATTGAAGGTTGATGGAAAATCTGGTGGAGGCATAGAGAAGAAAACCAATGATAAATTCTCATATATATATGATGGATTGTATTTGGTTGAGAAGATGACACAAGAAAGAGGAACTCATGGGAAACTTGTATTCAAGTTTTTGTTGAACAAACTTGGAGAGCTACCTTCAACTTGTGTTCTCCACAAGGATGAGGTTATCAAGAATGTCAATAAATTTGGGCAACTTGATATTTTCACTTTGAGGAAAAGGCTCAAAACTAAAGGTTGTGCAACTAAAAATGATGTTATTATCATGAATGATATCTCCAACGGACAAGAGAAGTTTCCTATTCGAGTCGTTGCATCAACTGATGGTATTAAAATGCCTCCATCTTTTGATTACATAGTAAACAACATTTATGTTGATAGCTTCGAGAAGCGAATGTTATGTGGTTGTGACTGTGTAAATGGATGTGTGGATTGGGAGAAATGTGTCTGTATTGTTAAGAATGGTGGAACAATACCATATGACTCTAAGAAAAGACTTGCTTCTGGATTGGAATCATGTGTTATATACGAGTGCGGCTCTTCTTGCAAGTGTTCCTCGTCTTGCTACAACCGATTAAGTCAACATGGCCTTCAATTCCAACTTGAAATCTTCAACTCCGAATCAAAGGGCTGGGGTGTTAGAACGCGCTCTTTCATTCCTGCTGGAAGCTTTGTTTGTGAGTACATTGGTGAAGTCCATCATCATAGAGAAGCTGGATCTAGGCAAAAAGTTGATAGTTATGTTGTAAATATGGTTGTTGAAAAGGGTTTCATTGATGCTACAAGATGCGGAAACATTGGAAGATTCATAAACCATAGCTGTTCTCCTAATCTTCAAGTCATGGAGGTTATGTATGATGACAATGATAAGAACCTTCCCCATAAAATCTTTTTTGCATTACAGGACATACCTGCTGGAAGAGAGCTGAGTTTTGATTACAACATCTGCAAGCCAAGGGTTATCGGGACTGGCAGCAACATTTGCCAATGTGGTTCGTCCAAATGCGTTGGGCGAATTTACATTTAA 1647 0.3965 MNLTLYHLGMEDSKSFGIKQEGYHNPSSIMKTEEFSFRRSKVKQALMIFRNLFSKLFSEYKTDHYDNVKAKFKALSDAAMLMQRKHQWVNCQKRVGHVPGIEVGDRFQYRNELNVVGLHRQFVNGIDYVGKGKNSLATSIVVTNRYDNARNHGGSLVYSGQGWNPNVKGGSMPRDQKLAGGNLALKNSMDAKSPVRVILKVDGKSGGGIEKKTNDKFSYIYDGLYLVEKMTQERGTHGKLVFKFLLNKLGELPSTCVLHKDEVIKNVNKFGQLDIFTLRKRLKTKGCATKNDVIIMNDISNGQEKFPIRVVASTDGIKMPPSFDYIVNNIYVDSFEKRMLCGCDCVNGCVDWEKCVCIVKNGGTIPYDSKKRLASGLESCVIYECGSSCKCSSSCYNRLSQHGLQFQLEIFNSESKGWGVRTRSFIPAGSFVCEYIGEVHHHREAGSRQKVDSYVVNMVVEKGFIDATRCGNIGRFINHSCSPNLQVMEVMYDDNDKNLPHKIFFALQDIPAGRELSFDYNICKPRVIGTGSNICQCGSSKCVGRIYI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2066 548 ProSiteProfiles YDG domain profile. 96 248 IPR003105 -
Ahy12g2066 548 ProSiteProfiles SET domain profile. 406 521 IPR001214 GO:0005515
Ahy12g2066 548 SUPERFAMILY SET domain 288 527 IPR046341 -
Ahy12g2066 548 SUPERFAMILY PUA domain-like 78 253 IPR015947 -
Ahy12g2066 548 Pfam Pre-SET motif 299 398 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy12g2066 548 SMART set_7 406 527 IPR001214 GO:0005515
Ahy12g2066 548 Pfam SET domain 417 521 IPR001214 GO:0005515
Ahy12g2066 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 26 545 - -
Ahy12g2066 548 ProSiteProfiles Pre-SET domain profile. 341 403 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy12g2066 548 Gene3D SET domain 273 526 IPR046341 -
Ahy12g2066 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 26 545 - -
Ahy12g2066 548 SMART G9a_1 91 251 IPR003105 -
Ahy12g2066 548 Gene3D - 77 270 IPR036987 -
Ahy12g2066 548 Pfam SAD/SRA domain 95 249 IPR003105 -
Ahy12g2066 548 SMART preset_2 296 390 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2066 Ahy-Chr12 105043710 105048239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2066 74 544 Su(var)3-9 homologs AT1G73100 35.352 1.18e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy12g2066 SAD_SRA 2.90E-41 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2066 - K11420 aip:107627681 848.195