Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2042 ATGGCAAAACATGAAAAACCACAACCTGGGTGTTTCTCTGGATTCTTGCGTGTGATCCTATGTGCTGGAACTGGAACTAGTCCTCCAGTTCATCCATCTCAAGATGAATCAGAAAATGTGGATTCAATTTCAAACAAAAGAGATGCATTGATCCATGAAGATTTTGCTGCTACCCCCGGATTGGTGGCAAGACTAATGGGGTTGGATTCTGTTCCCAACACCAACTGTTTGATGAAAGGACACTCCCCAGATTCAGTTCCAAGGAGTAGGTCAGTGAATTTTGTGGACTACTTGCTAAATTTCGAAGTAGGCCAAGAAAATTTCCATCGCCGGGCGAAGACTTCAGCCTCGTTTCGTGAGGTTCCGGCATCTGCATTGGCTTATAGTCAGCAAAAACAAGATCATGATCTTGTTGTGTTTCATAATTGGGATTACAATGTGGTTAAGGATCATGAAGCTCGACGCGAGTCGAGGAAATTTGAAGTAGGGTTGATGAAAGAATCAAAGCAGGGGAAGAAACAGAGCAAAGAAACAGGGGAAAGGAATCAAAGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAACCTAGAAGGGTTCCTTCTAACTCTAATATGAATGGTAGAAAGGTTAGAAAGCAAAGTGAAGATAAAGATTGTTCTAGTGTCTCTTCATGTTCTTCAAAGAGTTATGGTTATAGATATAGTAGTAGTGGTGGTAATGGTGATTGTGATTCAAGCACAGGTTCTTGTTCTCCATTATTGCAAAGCAAGTATAAGAAAGAGTTTGTTGAATCAAATCTCAAAAACAAGATGAGAAAGAAGAAATCACCAAAGAAGATAGAGAGTGATTGTGTCTCAGAAAATCTCAGTCCAATTTCAGTTCTTGATGTCAATGATTCTCCTTCCCTCTATGGAACAACTTCTCTAGATGCTACACAACCCTTGCCTTCAAACTCAAAGTGGAAATCTTCACCACTGAGATCATCAAGCGATGGAATTGAAGCCACAAGAAGCAATGAGAAAGATGGTGCTTATGCCAACATTGACATCAACGGAGAAGTAGAATATTACTCAGAATTATTTTTAAAACTTTGCACAATGATAGAAAAGGATATAAGAGAGTTAGATTGCACAACGAAGCATGTGCACGAGGATTTTGAGCAAATTTGTTTGGTGTTTGAACACAAAATTTTGGATCTTTTATTACACGAACTTGTCAATGATATTGTGGAACTTTCATGTTGA 1245 0.3888 MAKHEKPQPGCFSGFLRVILCAGTGTSPPVHPSQDESENVDSISNKRDALIHEDFAATPGLVARLMGLDSVPNTNCLMKGHSPDSVPRSRSVNFVDYLLNFEVGQENFHRRAKTSASFREVPASALAYSQQKQDHDLVVFHNWDYNVVKDHEARRESRKFEVGLMKESKQGKKQSKETGERNQRKNKKISKLKNEPRRVPSNSNMNGRKVRKQSEDKDCSSVSSCSSKSYGYRYSSSGGNGDCDSSTGSCSPLLQSKYKKEFVESNLKNKMRKKKSPKKIESDCVSENLSPISVLDVNDSPSLYGTTSLDATQPLPSNSKWKSSPLRSSSDGIEATRSNEKDGAYANIDINGEVEYYSELFLKLCTMIEKDIRELDCTTKHVHEDFEQICLVFEHKILDLLLHELVNDIVELSC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2042 414 MobiDBLite consensus disorder prediction 159 227 - -
Ahy12g2042 414 PANTHER ALC-INTERACTING PROTEIN 1 1 413 - -
Ahy12g2042 414 PANTHER OS05G0128300 PROTEIN 1 413 - -
Ahy12g2042 414 MobiDBLite consensus disorder prediction 307 333 - -
Ahy12g2042 414 Pfam DUF761-associated sequence motif 58 75 IPR032795 -
Ahy12g2042 414 MobiDBLite consensus disorder prediction 307 337 - -
Ahy12g2042 414 Coils Coil 175 195 - -
Ahy12g2042 414 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2042 Ahy-Chr12 104501041 104503653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2042 1 409 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.123 3.66e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2042 - - lang:109342337 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2042 12 104501041 104503653 Ahy12g2042 12 104501041 104503653 ECH
Ahy12g2042 12 104501041 104503653 Ahy2g1769 2 90020272 90022811 hybridization
Ahy12g2042 12 104501041 104503653 Ahy14g2217 14 121959522 121963412 PCT
Ahy12g2042 12 104501041 104503653 Ahy4g1953 4 111562640 111566615 PCT