Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2041 ATGGAGGGTCATCAACATCATCATCAACAACCACAACAACATCTTCTTCAACAAATTCTTCTACCCCATCATCAACAACAACAACATAATATGATAATAAACGTGGATGGTGGTGGAGGAATTAGTGACAGGTTTCCACAGTGGAGCATACAGGAGACTAAAGAGTTTCTAATGATCCGTGCGGAGCTTGATCAAACTTTCATGGAGACAAAGAGGAACAAGCAATTGTGGGAAGTCATATCCAATAATATGAAGGAAAAGGGTTACCATAGAAGTGCAGAACAGTGCAAGTGCAAATGGAAAAACCTTGTTACCCGCTATAAGGGATGTGAAACAATGGAACCAGAAGCATTGAGACAACAATTCCCATTCTACAATGAAATTCAAGCAATTTTCACATCAAGAAGCATGCAAAGAATGCTTTGGGGTGAAGGTGAAGGAACTTCAAAGAAGAACAAAACCATGCAACTCTCATCCGAAGAAGAAGAAGAAGAAGAAGAAAACAATGAAGAGAGTGAGGAACATCAAAAGGGTATTAGAATGAGAAGAAAAAAGAAGAAAGCAAAGATAAGTAGTGGTGGCAACAATAAGAATAGTGATTTTCTGAATAATTTGAAGGAGATTCTTGAGGAGTTCATGAGGCAACAGATGCAAATGGAGGCGCAATGGATGGAGGCGTTCGAGTCGAGGGAGAAGGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACAATGGAGGCTTTGGAGAATGAGAGGATAATGATGGATCAAAGATGGAGAGAGAGGGAAGAACAAAGGAGGGTTAGGGAAGAAGTTAGGGCTCAAAATAGAGATGAACTAATCACAACCCTCTTACACAAACTACAACAACAAAGTGAAGATGATTTTTAG 891 0.4018 MEGHQHHHQQPQQHLLQQILLPHHQQQQHNMIINVDGGGGISDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEALRQQFPFYNEIQAIFTSRSMQRMLWGEGEGTSKKNKTMQLSSEEEEEEEENNEESEEHQKGIRMRRKKKKAKISSGGNNKNSDFLNNLKEILEEFMRQQMQMEAQWMEAFESREKERRMKEMEWRQTMEALENERIMMDQRWREREEQRRVREEVRAQNRDELITTLLHKLQQQSEDDF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2041 296 Pfam Myb/SANT-like DNA-binding domain 47 131 IPR044822 -
Ahy12g2041 296 Coils Coil 202 222 - -
Ahy12g2041 296 CDD GT1 46 111 - -
Ahy12g2041 296 MobiDBLite consensus disorder prediction 143 199 - -
Ahy12g2041 296 Coils Coil 150 175 - -
Ahy12g2041 296 PANTHER - 1 292 - -
Ahy12g2041 296 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 292 - -
Ahy12g2041 296 Gene3D - 48 109 - -
Ahy12g2041 296 ProSiteProfiles Myb-like domain profile. 48 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2041 Ahy-Chr12 104465389 104467072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2041 43 295 Trihelix Transcription Factor Family AT5G01380 52.920 3.29e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy12g2041 Myb_DNA-bind_4 1.10E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2041 - - aip:107628470 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2041 12 104465389 104467072 Ahy12g2041 12 104465389 104467072 ECH
Ahy12g2041 12 104465389 104467072 Ahy2g1768 2 89983945 89985593 hybridization