Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2040 ATGGGCAACTGCTGCCGATCTCCAGCTGCCGTCGCCCGCGAGGACGTGAAATCATCATTCTCCGACCACACCAAAGGAAAACACACCTCCGCAGCCAGCGCCGCCGGAAAACAGAAAAATGCTCCGATCACGGTCCTCGCCGGCGTTCCCAAGGAGAACATTGAGGAGAAGTACCTGGTGGACCGTGAGCTCGGGCGTGGGGAGTTCGGCGTGACGTACCTCTGTATCGACCGGGGATCGAGAGAGCTGCTTGCTTGCAAGAGCATCTCGAAGCGGAAGTTGCGGACGGCGGTGGACGTCGAGGACGTCCGCCGTGAGGTGGCGATCATGCGCCACCTGCCGCGGAGCTCCAGCATCGTGTCGCTTCGTGAGGCGTGCGAGGATGACAACGCCGTGCACCTTGTAATGGAGCTCTGCGAGGGTGGGGAACTCTTTGACAGGATCGTGGCCAGGGGGCGTTACACGGAGCGCGCTGCCGCCGCAGTTGCAAGGACCGTCGTGGAGGTTGTGCAGCTGTGCCATAGGCATGGTGTGATTCACAGGGACCTGAAGCCGGAGAATTTCCTGTTTGCTAATAAGAAGGAGAATTCGCCGCTCAAGGCTATTGATTTCGGGCTTTCCATATTCTTCAAGCCAGAATCTGAACAAGGGGTTGCACAGGCTATTCTCAGAGGGCTTATAGATTTCAAACGAGAACCTTGGCCGAGTATTTCAGAAAGTGCTAAAAGTCTTGTTAGGCAAATGTTAGAACCAGACCCTAAACTTCGACTAACTGCCAAACAGGTGCTTGAGCATCCTTGGATCCAAAATGCTAAGAAGGCTCCAAATATTCCTCTTGGGGATGCTGTAAAATCAAGACTTAAGCAGTTTTCTATGATGAATAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTGTCCAATGAAGAAGTTGAAGACATCAAAGATATCTTCCAAAAGATGGATACTGATAACGATGGTATTGTTTCCATTGAAGAACTAAAAGCTGGATTTCAAAATTTCGGATCTCAACTTGCCGAGTCTGAAATTCAGATGCTTCTTGAAGCTGTAAATACTAATGGGAAGGGAACCCTTGACTATGGAGAATTTGTTGCAGTTTCCCTCCATCTAAAAAGGATGGCTAATGATGAGCATCTTCGCAAGGCCTTCTCTTACTTTGACAAGGATGGGAATGGTTATATTGAACCAGACGAGTTACGGAATGCTTTGATGGAAGACGGGACAGATGATTGTGCAGACGTAGCAAATGATATTTTCCAGGAAGTGGACACAGACAAGGATGGACGCATCAGCTATGAAGAATTTGTGGCTATGATGAAAACCGGAACAGATTGGAGAAAAGCATCTAGGCATTACTCACGCGGGAGATTCAACAGCTTGAGCTTAAAGTTGATGAAGGACGGTTCTGTAAATTTAGGAACTGAGCAGTTACTTGTTTGA 1467 0.4888 MGNCCRSPAAVAREDVKSSFSDHTKGKHTSAASAAGKQKNAPITVLAGVPKENIEEKYLVDRELGRGEFGVTYLCIDRGSRELLACKSISKRKLRTAVDVEDVRREVAIMRHLPRSSSIVSLREACEDDNAVHLVMELCEGGELFDRIVARGRYTERAAAAVARTVVEVVQLCHRHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWIQNAKKAPNIPLGDAVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDIFQKMDTDNDGIVSIEELKAGFQNFGSQLAESEIQMLLEAVNTNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALMEDGTDDCADVANDIFQEVDTDKDGRISYEEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSVNLGTEQLLV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2040 488 ProSiteProfiles Protein kinase domain profile. 58 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2040 488 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 6 212 - -
Ahy12g2040 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Ahy12g2040 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 212 - -
Ahy12g2040 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 213 466 - -
Ahy12g2040 488 ProSiteProfiles cAMP/cGMP binding motif profile. 66 121 IPR000595 -
Ahy12g2040 488 MobiDBLite consensus disorder prediction 16 36 - -
Ahy12g2040 488 SMART serkin_6 58 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2040 488 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Ahy12g2040 488 Gene3D - 275 452 - -
Ahy12g2040 488 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 213 466 - -
Ahy12g2040 488 ProSitePatterns EF-hand calcium-binding domain. 324 336 IPR018247 -
Ahy12g2040 488 SUPERFAMILY EF-hand 297 475 IPR011992 -
Ahy12g2040 488 Pfam EF-hand domain pair 386 449 IPR002048 GO:0005509
Ahy12g2040 488 Pfam EF-hand domain pair 314 374 IPR002048 GO:0005509
Ahy12g2040 488 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Ahy12g2040 488 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Ahy12g2040 488 SUPERFAMILY Protein kinase-like (PK-like) 49 292 IPR011009 -
Ahy12g2040 488 SMART efh_1 423 451 IPR002048 GO:0005509
Ahy12g2040 488 SMART efh_1 351 379 IPR002048 GO:0005509
Ahy12g2040 488 SMART efh_1 387 415 IPR002048 GO:0005509
Ahy12g2040 488 SMART efh_1 315 343 IPR002048 GO:0005509
Ahy12g2040 488 ProSiteProfiles EF-hand calcium-binding domain profile. 311 346 IPR002048 GO:0005509
Ahy12g2040 488 Gene3D Transferase(Phosphotransferase) domain 1 213 274 - -
Ahy12g2040 488 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Ahy12g2040 488 Gene3D Transferase(Phosphotransferase) domain 1 50 212 - -
Ahy12g2040 488 Pfam Protein kinase domain 60 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g2040 488 CDD EFh 387 449 IPR002048 GO:0005509
Ahy12g2040 488 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2040 Ahy-Chr12 104397419 104403071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2040 36 481 EF-hand Containing Proteins AT1G74740 62.146 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy12g2040 Pkinase 5.40E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2040 K13412 - gmx:100783922 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2040 12 104397419 104403071 Ahy12g2040 12 104397419 104403071 ECH