Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2033 ATGGCAACTCATCAATTGAACCACATGTTCAAAACATCCATGGTGAAGAATCACAAGAAACAACAACCAAGAACACCAAGGTTCCATGTCTTCAACAATGCAACAACATCTTCAACCACAACTCCTATGAGTGCTAGGAAGCTCATAGAATCTGGCACCGTGAAAACTATATTTCCCAAAGATGCTTCAATTGCCATGAATTCTGAAGGGTTTCTTCTCCTTGATGTTAGGCCAACATGGGAGACAGAGAAGGCACGTGTTGTGGGGTCTGTGCACGTGCCAATCTTTGTTGAAGACACAGATAATAGCCCTGTAACATTACTTAAGAAATGGGTGCATTTTGGTTATATTGGATTATGGACTGGTCAATATCTAACTACATTGAACCCTGAGTTTCTTGGTCAAGTTGAAGTGGCTATTCCGGATAAGGGTACCAAGGTTCTTGTGGCTTGTGGAGAGGGATTAAGGTCAATGGCAGCAGCTTCAAAGTTATATAATGGAGGTTACAAAAATCTGGGATGGTTAGCCGGCGGCTTCAGCCGATCAAAGGACGACGACTTCCCTGGGATCGAAGGAACAGAGAAGTTGCAGTATGCTACAGTTGGAGGAGTCTCTTACTATTTTCTTCAGTTGCTTATACTTCTACAAGCAGTGGGTAAATGA 663 0.4284 MATHQLNHMFKTSMVKNHKKQQPRTPRFHVFNNATTSSTTTPMSARKLIESGTVKTIFPKDASIAMNSEGFLLLDVRPTWETEKARVVGSVHVPIFVEDTDNSPVTLLKKWVHFGYIGLWTGQYLTTLNPEFLGQVEVAIPDKGTKVLVACGEGLRSMAAASKLYNGGYKNLGWLAGGFSRSKDDDFPGIEGTEKLQYATVGGVSYYFLQLLILLQAVGK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2033 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 4 220 IPR044614 -
Ahy12g2033 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 49 189 IPR036873 -
Ahy12g2033 220 SMART rhod_4 57 188 IPR001763 -
Ahy12g2033 220 CDD RHOD 66 180 - -
Ahy12g2033 220 Pfam Rhodanese-like domain 60 181 IPR001763 -
Ahy12g2033 220 Gene3D - 54 201 IPR036873 -
Ahy12g2033 220 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2033 Ahy-Chr12 104095210 104096502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2033 5 207 Sulfurtransferasese or Rhodanese AT3G08920 56.373 4.62e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2033 - - gmx:100795945 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2033 12 104095210 104096502 Ahy12g2033 12 104095210 104096502 ECH
Ahy12g2033 12 104095210 104096502 Ahy2g1761 2 89739835 89741174 hybridization