Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2028 ATGGGGTCTAGGAGCCATGAAGAATCACCATGGCTATTGGAAAATGGGAATCCAAAGGTGTTGACCAAGGATATGAGACATGGAAGAACAGCACACAACATGTCATCATCTTCTTTGAGGAAAAAATCTGAACTCACTGTTATTTCAAAGGTTCCCTATGGATTCCTCAGAAACTTTCTTGCTAACTTGCAAGAGGTTTTTCTTGGAACCAAGCTTTTCATTCTCTTCCCATCAATTCCTCTTGCTATCATTGCCCATTGTTTTGGTTTTGCAAGACCATGGGTTTTTGCCATGAGCTTACTTGGTTTAACCGTACTTGCTGAAAGAGTCAGCTTCATGACTGAGCAAGTCGCTTGTTACACCGGTCCCACAGTTGGAGGACTTCTGAATGCTACATGTGGGAATGCAACAGAGCTTATCATAGCAATTTTTGCACTTAGTAACAACAAAATTGCTGTGGTCAAGTATTCTCTTCTTGGTTCTATACTTTCAAACCTTCTTTTGGTTCTTGGCACTTCCCTACTTTGTGGTGGCATTGCAAATCTTAGGCAGGAACAAAAATATGAGAGAAGGCAAGCTGATGTGAACTCTCTTATGCTGCTTCTGGGATTGTTGTGCCACATGCTCCCACTGCTGTTCAGATATGGCGGCGGCTCACCGGCTGTGGTGGCCGAGGCATCCTTGAATGTGTCTAGAGCTGCTAGCCTTGTGATGTTGTGTGCTTACTGTGCTTACATTGCCTTCCAACTTTGGACTCACCGGCAACTATTCGAAGCACAAGTAGATAATGATGATGAAGGTCAAAATGATTCAGAAGAAGCAGTGATAGGTTTCTGGAGTGGGATTGGTTGGCTTGTTGGAATGACTGCAATTATGGATCTCTTGTCTGAATATGTGGTGCAGACTATAGAGGATGCATCAAATTCATGGGGTTTGTCTGTGAGTTTCATCAGCATAATCTTGCTCGCAATCGTTGGCAATGCCGCCGAACATGCTGGAGCTATCATATTTGCTTTCAAGAACAAACTGGACATCACATTAGGTGTTGCTTTGGGGTCTGCAACTCAGATTAGCATGTTTGTGGTTCCAGTGTGTGTGATTGTTGGTTGGATTCTTGGCATAAAAATGGACCTCAACTTCAACCTCTTGGAGACAGGTTCTCTTGCTTTGGCAATAATTGTCACAGCCTTTACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTTCTATGCTACATTGTTATTGGGGCCTGCTTTTTCGTTCAGACAACACCCTCTGATCAACTTAATGATGAAGTTCATAATGTGATGCTTAAACCAGCAACCGATGCAGTTTTTAGAGCTTAA 1359 0.4297 MGSRSHEESPWLLENGNPKVLTKDMRHGRTAHNMSSSSLRKKSELTVISKVPYGFLRNFLANLQEVFLGTKLFILFPSIPLAIIAHCFGFARPWVFAMSLLGLTVLAERVSFMTEQVACYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLRQEQKYERRQADVNSLMLLLGLLCHMLPLLFRYGGGSPAVVAEASLNVSRAASLVMLCAYCAYIAFQLWTHRQLFEAQVDNDDEGQNDSEEAVIGFWSGIGWLVGMTAIMDLLSEYVVQTIEDASNSWGLSVSFISIILLAIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQISMFVVPVCVIVGWILGIKMDLNFNLLETGSLALAIIVTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQTTPSDQLNDEVHNVMLKPATDAVFRA* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2028 452 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 5 437 - -
Ahy12g2028 452 TIGRFAM caca2: calcium/proton exchanger 58 424 - -
Ahy12g2028 452 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016021|GO:0055085
Ahy12g2028 452 Pfam Sodium/calcium exchanger protein 282 419 IPR004837 GO:0016021|GO:0055085
Ahy12g2028 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 437 IPR004713 GO:0006812|GO:0008324|GO:0016021
Ahy12g2028 452 Gene3D - 123 423 IPR044880 -
Ahy12g2028 452 TIGRFAM cax: calcium/proton exchanger 78 424 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2028 Ahy-Chr12 103935971 103941376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2028 10 433 Antiporters AT2G38170 70.046 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2028 K07300 - gmx:100782052 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2028 12 103935971 103941376 Ahy12g2028 12 103935971 103941376 ECH
Ahy12g2028 12 103935971 103941376 Ahy2g1755 2 89601083 89605994 hybridization
Ahy14g1866 14 106126693 106131756 Ahy12g2028 12 103935971 103941376 PCT
Ahy4g1655 4 98142202 98147204 Ahy12g2028 12 103935971 103941376 PCT
Ahy12g2028 12 103935971 103941376 Ahy14g1866 14 106126693 106131756 PCT
Ahy12g2028 12 103935971 103941376 Ahy4g1655 4 98142202 98147204 PCT