Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2021 ATGTCTTCAATAACAATGACAACGGTTGCATCTTCCTTTATTGGAACACGTTTACCAGAGTCATATGCCAGTTCAGGTAGAGTACAAGCCCGATTTGGCTTTGGATCTAAGAAAAGTAGTCCGGCCAAAAAAGGTTCTAGACAACCCACTTCAGATAGGCCGCTCTGGTACCCTGGTGCAAAGGCACCAGAGTATCTAGATGGTAGCCTCGTAGGTGATTATGGGTTCGATCCATTTGGCCTAGGAAAGCCGGCAGAGTATCTCCAGTTTGACCTAGACTCCCTTGATCAGAACTTAGCGAAGAACGTTGCAGGTGACGTGATTGGGACGAGGACGGAAGTGGCAGACGTGAAGGCAACGCCATTTCAGCCATACAGTGAGGTTTTTGGACTCCAAAGGTTCAGGGAGTGTGAACTCATACATGGAAGGTGGGCTATGTTGGCCACTCTTGGTGCTCTCACAGTAGAATGGCTCACCGGTATTACATGGCAGGATGCTGGCAAGGTGGAGCTAATAGAAGGGTCACAATACCTAGGTCAACCACTTCCATTCTCACTTACCACATTGATTTGGATTGAAGTTCTAGTGATTGGATACATAGAGTTCCAGAGGAATGCAGAGCTTGACCCAGAGAAGAGGCTTTACCCAGGTGGTAAGTTCTTTGACCCATTGGGCCTTGCTGAAGACCCTGAGAAGAAGGCCACGCTTCAATTGGCTGAGATCAAACATGCTCGCCTTGCTATGGTTGCCTTTTTGGGCTTTGCTGTCCAGGCTGCTGTAACTGGGAAAGGCCCACTTAACAATTGGGCTACTCATTTGAGTGACCCACTTCACACTACCATCATTGACGCCTTCTCTTCCTCTTCTTGA 870 0.4816 MSSITMTTVASSFIGTRLPESYASSGRVQARFGFGSKKSSPAKKGSRQPTSDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRTEVADVKATPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELIEGSQYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDAFSSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2021 289 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Ahy12g2021 289 SUPERFAMILY Chlorophyll a-b binding protein 48 286 - -
Ahy12g2021 289 MobiDBLite consensus disorder prediction 33 57 - -
Ahy12g2021 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 6 288 IPR001344 GO:0009765|GO:0016020
Ahy12g2021 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 6 288 - -
Ahy12g2021 289 Gene3D Chlorophyll a/b binding protein domain 56 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2021 Ahy-Chr12 103751781 103753832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2021 14 288 Chloroplast and Mitochondria Gene Families AT3G08940 84.058 1.23e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2021 K08915 - rcu:8267514 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2021 12 103751781 103753832 Ahy12g2021 12 103751781 103753832 ECH
Ahy12g2021 12 103751781 103753832 Ahy2g1743 2 89328154 89330189 hybridization