Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1985 ATGCCTTCTTCATCCACAAGCATAATTTCAAAATGCACAATCTATCCAGACCAAAAATCCACCCTCAAACCCTTACACCTCTCTGTCTCTGACCTCCCCATGCTTTCTTGCCACTACATCCAAAAGGGAGTCCTCCTCTCTTCTCCCCCTCAACCCTTTCAAGACCTCATCGACTCCCTCAAGCTCTCTCTCTCCACCACACTCTCTCTCTTCCCCGCCCTTGCCGGCCGCTTCTCCACCGACTCCGCCGGCCATGTTCACATCGTTTGCAACGACGCCGGAGTTGATTTTATCCACGCCAATGCCAAGCATCTCACCCTCGCCACCCTCCTCTCGCCGCCAGCCAATTTTCCCGATGTCCATCCTTCCTTCAAGGAGTTCTTTGCTTACGATATGACTATTTCTTACTCTGGCCACCACCTTCCCCTCGCCGCCGTCCAGGTCACCGAGCTTGCCGATGGCGTCTTCGTCGGCATCACCGCCAACCACGCTGTCACCGACGGTACCTCCTTCTGGCACTTCTTCAACACATTCGCCGCCGTCACCAAGGCTGCCGGCTCCGGCGCCAAAAAGAAGATAGCTAGCTACCCGGACTTCACTCGCGACACCGTCTTCAACTCCGCCGTCGTCCTCCCCGTCCCAGCCAGCGGTCCCACCGTGACGTTCGCCGCCGACGAGCCTCTCCGGGAGCGAGTCTTTCATTTCTCCAGGGAAGACATCCAGAGACTGAAAAAGCAAGCTAACAGTAACCGCCACAACAACGACGGTTGGAAAAACGCTGGAGTTAACGGTAACGTAAACTGTAATGGAAACGGTAGGGTAGCGACTGTTAATGTGAGGAACAACGACGAGATCTCGTCGTTTCAATCTTTATCTGCTCAGCTTTGGCGATCCGTGACACGTGCCAGGAAATTAGACGCTTCGAAAACGTCGACGTTTAGGATGGCCGTTAATTGCCGTCACCGTTTGGAACCAAAGATGGATCCGTTTTACTTTGGGAACGCGATTCAGAGCATCCCAACGGTCGCAACGGTTGGGGATATTGTTTCCAACGAGGTCGGCTTTTGCGCCGAACTGCTGCACCGTAACGTCATCGCGCACGATGATTCTACGGTGCGGCGTGGCATAGAAGACTGGGAAAAGGCCCCGAGACTGTTCCCTCTCGGTAACTTCGACGGAGCCATGATTACTATGGGGAGTTCGCCGCGTTTTCCAATGTACGACAATGATTTCGGGTGGGGAAAGCCGTTGGCGATTCGGAGCGGGAAGGCAAACAAGTTCGACGGCAAGATCTCAGCGTTTCCCGGTAGGGAAGGAAACGGCAGCGTTGATCTTGAAGTCGTTTTGGCACCAGAAACGATGGTGGGACTTGAAAACGACATGGAATTTATGCAGTACGTGACGTCATTCGAATAA 1416 0.5388 MPSSSTSIISKCTIYPDQKSTLKPLHLSVSDLPMLSCHYIQKGVLLSSPPQPFQDLIDSLKLSLSTTLSLFPALAGRFSTDSAGHVHIVCNDAGVDFIHANAKHLTLATLLSPPANFPDVHPSFKEFFAYDMTISYSGHHLPLAAVQVTELADGVFVGITANHAVTDGTSFWHFFNTFAAVTKAAGSGAKKKIASYPDFTRDTVFNSAVVLPVPASGPTVTFAADEPLRERVFHFSREDIQRLKKQANSNRHNNDGWKNAGVNGNVNCNGNGRVATVNVRNNDEISSFQSLSAQLWRSVTRARKLDASKTSTFRMAVNCRHRLEPKMDPFYFGNAIQSIPTVATVGDIVSNEVGFCAELLHRNVIAHDDSTVRRGIEDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGKPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMVGLENDMEFMQYVTSFE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1985 471 Pfam Transferase family 8 464 - -
Ahy12g1985 471 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 468 - -
Ahy12g1985 471 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 468 - -
Ahy12g1985 471 Gene3D - 226 464 IPR023213 -
Ahy12g1985 471 Gene3D - 6 211 IPR023213 -
Ahy12g1985 471 SUPERFAMILY CoA-dependent acyltransferases 57 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1985 Ahy-Chr12 102654287 102656073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1985 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.540 9.60e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1985 - - gmx:100780358 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1985 12 102654287 102656073 Ahy12g1985 12 102654287 102656073 ECH
Ahy12g1985 12 102654287 102656073 Ahy2g1710 2 88329647 88331417 hybridization