Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1983 ATGTATGCAACTATTGCCTATAGCTTATTAGAAGAAGAAGAAGAAATGAACAGGGGAATTGAAGTTCTGTCTCCGGCTTCTTACCTTCACAACTCAAATTGGTTGTTCCAAGAGAGTGCAGGAACCAAATGGACACCACAAGAGAACAAGCAATTTGAGAACGCTTTGGCGCTCTTCGACAAGGAGACGCCGGACCGGTGGCTGAAGGTGGCGGCTATGATCCCGGGGAAGACGGTTGGTGATGTGATCAAACAGTATAGGGAGTTAGTTGAAGATGTTAATGTAATTGAATCTGGGTTCATACCAATTCCAGGGGGAACTACTGATGGTTCTTTCACATTGGAGTGGGTTGATAATCATGAATTTGATGGGTTTAAGCAATTCTATGGTGTTGGTTGCAAAAGGGGTTCTTCCACTAGGCCTTCTGAACAAGAAAGGAAGAAAGGTGTACCATGGACGGAAGAAGAGCACAGGCTATTTTTGATGGGTTTGAAGAAGTATGGTAAAGGTGATTGGAGAAATATATCTCGAAATTTTGTTACAACAAGGACGCCGACGCAAGTTGCAAGTCATGCTCAGAAATACTTTATCCGGCAACTTAACGGCGGCAAGGATAAGCGGAGATCCAGTATCCATGATATCACAATGGTTAATCTCCCTGAAACAAAGTCGCCTTCGTCGGAAAGTAACAAACCTCCTTCTCCAGATGCAAATTTGAATCAGAATCAGAAGCTTTTGTCAAGCATGGTTAAACAGGAATATGACTGGAAATCACCACCATATGAGGGTGTGCCTTTGCTGTTTGATTCAACAAATGGAAATTCGTTCATGACACCTTTGTGTGGAGCTTCTTCATACGGATCTAAACCTCAGGAGCAGTATTTACTCAGAGGAACTTTCCATGGATTTCAATTTGGACCTTATGATACTTTTATGCAAATGCAACCTCAGTGA 954 0.4256 MYATIAYSLLEEEEEMNRGIEVLSPASYLHNSNWLFQESAGTKWTPQENKQFENALALFDKETPDRWLKVAAMIPGKTVGDVIKQYRELVEDVNVIESGFIPIPGGTTDGSFTLEWVDNHEFDGFKQFYGVGCKRGSSTRPSEQERKKGVPWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLNGGKDKRRSSIHDITMVNLPETKSPSSESNKPPSPDANLNQNQKLLSSMVKQEYDWKSPPYEGVPLLFDSTNGNSFMTPLCGASSYGSKPQEQYLLRGTFHGFQFGPYDTFMQMQPQ* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1983 317 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 16 244 IPR043363 -
Ahy12g1983 317 MobiDBLite consensus disorder prediction 203 240 - -
Ahy12g1983 317 SUPERFAMILY Homeodomain-like 145 199 IPR009057 -
Ahy12g1983 317 ProSiteProfiles SANT domain profile. 39 94 IPR017884 -
Ahy12g1983 317 PANTHER TRANSCRIPTION FACTOR DIVARICATA 16 244 - -
Ahy12g1983 317 ProSiteProfiles SANT domain profile. 152 200 IPR017884 -
Ahy12g1983 317 CDD SANT 43 90 IPR001005 -
Ahy12g1983 317 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Ahy12g1983 317 Gene3D - 150 200 - -
Ahy12g1983 317 CDD SANT 151 196 IPR001005 -
Ahy12g1983 317 Pfam Myb-like DNA-binding domain 151 196 IPR001005 -
Ahy12g1983 317 Pfam Myb-like DNA-binding domain 43 89 IPR001005 -
Ahy12g1983 317 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 147 199 IPR006447 GO:0003677
Ahy12g1983 317 Gene3D - 36 103 - -
Ahy12g1983 317 ProSiteProfiles Myb-like domain profile. 144 196 IPR001005 -
Ahy12g1983 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 200 IPR017930 -
Ahy12g1983 317 SMART sant 40 92 IPR001005 -
Ahy12g1983 317 SMART sant 148 198 IPR001005 -
Ahy12g1983 317 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1983 Ahy-Chr12 102431997 102435249 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy12g1983 Myb_DNA-binding 2.40E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1983 - - gmx:778077 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1983 12 102431997 102435249 Ahy17g0990 17 12468825 12470694 ECH
Ahy12g1983 12 102431997 102435249 Ahy12g1983 12 102431997 102435249 ECH
Ahy12g1983 12 102431997 102435249 Ahy17g1518 17 30195923 30198725 ECH
Ahy12g1983 12 102431997 102435249 Ahy11g0426 11 5816066 5818688 ECH