Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1978 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTATTTGAGTTTCCGAGGCCAAGACACTCGCCACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTCATGTTTTCAGGGACGAGGTGGCGCTTGGGAGAGGAGAGCAGATAACATACACACTGATTCAAGCAATCGAAGCTTCTAGACTTTTGGTTGTTGTTTTCTCAGAAAGTTATGCTGGTTCTAGATGGTGTCTGGACGAGTTGATGAAAATAATGGAGTGTATAAGCACTGGAGGTCAAACTGTCATTCCGGTATTCTACAATGTTGATCCCGCAGATGTACGCCACCAGAGAGGTCCTTTTGGAGAAGCTTTTCAAAGTCATAGATTCTCATATGAGAATGAGATAGTCCATGCATGGAGGGCTGCGCTCACTGAAGCTGCTAACCTTTCTGGATTCGCAATCACCGGAGACAGAAATGAAGCTGAAATGATCGGAAAGATTGTTAAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAAGCATCTAGTGGGAGTACAATCTCGCACGGAAGATGTGATTCAAGAGTTACATTCTCATAAACCAGAAGACGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCGTCACGGTTTTGATAGGCCAATGTTCCTCCCAAACATTCGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGAAAAAGGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGTGGAAGTCCAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAGGTCTGCTTCGTAGGATTGGAGTTGAGTATGTGTACCAAGTGAAAGAAATGGATTACAATGAATCTCTTCAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGAAGATGTAGTTAAATATTGTGGGGGATTGCCATTGGCCCTTATAACAATTGGTTGTCAATTGTTTGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTGGACTCAAAAGGTTTCCCCATCCGGATGTACACAAAGTTTTGAAAATAAGCTTTGATGGCTTAAATGATGACAGAGAGAAAGAAATATTTCTTGATATAGCTAGCTTTTGTATTGGCATGGAAAGAGAGGAGGCACTGCAAACACTAAAGGATGCCTTTGGACTCAGCGAATATGGAATTGGTTTCCTTGAAGAGCAGAGTCTTATAACATTTGACGAGAAAGATAGAGTTCGAATGCATCCTTTGCTGCGTGACATGGGAAGAGAAATCGTTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGATGTACGATGTTTTTGTGAGTTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCACATCTCCATACATCTCTCCAAAATGCTGGAATTACTGCTTACAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATTCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCTATATTCTATGAAGTAGATCCCTCAGATGTACGTTATCAAAAGAAAGAGACTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCAGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAAGAATCAAACATTCAAAAGATAAAAGATGTTCTAATACTTGGGATAAAAGGCATGGGGGCGTTGGTAAAACCACTATTGCCAAAGCCATCTATAACAAAATTCGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATAAGTAACATTGATTCAGGGAAGCAAATATTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTCGTCCTGGGAGCGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGTCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAATAGAATGGCAAAGTGCATTGGATACTCTGAAATTAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAAGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGCGGACTCCATGCAGAAATTGGAATCAGTGCCCTTAAAGCGCGAAACCTTGTAACTGTTGATAACAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAATCACCTGAACTTGAAGAGCGAAGTAGATTATGGTATGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGATTTAAAGGCTAAGGGATTGAGTTTGAAGCTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAATATGACTAAACTTAAATTGCTTCAACTCGCGGGTGTACAACCTAATGGAGAGTTCAAACATCTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGATGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTTTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTTATGCAAAAATGTTCAAATGTTTTCACTTATGCAAATTGGCGTCCACGGCTTCAGATAAAAGGATATGTATCTTTGAAAACTGATAATGTGGCAAATTGCAATGAATTGGGGATGGATATTTCTGAACCAAAATCTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGACATACTTCAAAAGACTATTTTACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATTATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGAATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTACTATTCTACTTCTTCCACATTCACTACAACAGAAGATCTGATTCTTGAAAATGTGCAAATCTTAAATCTCTCAAGGGACATGTCCAATGTATTTAAGGGAGATAAGTTAGTTTCATTCAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCGTGCGGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGACGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGAGGAAAACTTGGAGCACTTCAATGATGATGAGGATGATATTGTTTGTTCTACTGGTGATGACGTTGTAGCTTCTGTGAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATTATGATGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGCAAAAGATGAGGATGGTGCTACTGTTGCTAATGTTGATGATGATATGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGCAACTGATATAAATGAAAGTTCTTCGAGTGTTGATGATAATAATGATGATGATGTTGCTGCCATTGGAGATAAAATGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATACATATTCTGAGCTTACATTGACTATGATGGTTTCAAAAGATGAGCTTCATGAAGATAGTGATTTGCTTATTGCAGAGTTGGATAAAACATTGTCAGAGAGCTACTTTCTGTACCCTAGTCCTGGATCATTAGAACTTCAAAGTCTCTCTGTGATTTCAATCTTTCAAAAAATGCAACTTCTTTTGGATAATGAACTAGAAGCCTTGGTAGGAGATGTTAACATCAAGAATCAGCTTCTTGGCTATGTGGCTCAATTAGGCCAAATAATAGGGTCATCACAAGTTCCTAAAGATCTTCACTCTTTGGTTACTGAGATTAATCACTTCTATGAAGATTTTCTCAATGATTTTCCGCCTGTTCAAGAAGTGTTAGACAATCATGAAAGATTGATTGACTCACAGAATGGACTTCAAGAGAAGTTAAAAGCGGCTAAGGCTAAACAGGGACACTTTTCTGCTTCAATTTCTAAAGGAAAAGAAAGGGTCAATGAGATGTCTAAAGAAATCAATGAATTGGAGGTGAAACTAAAAGCCTTGCATGAGAAGAGGAATAGGTTACAATTCAATGTGAAATGTTGTGAGTTTGAATCTATAAACATCAATAAGAATTTGGAAACTTTGATAAAAGAGAATGAAGAGGTTGTGAGCACTCTCAAAGAATCAGAATCTGCATTGAGAAAGGCTGAGTTGTCAAAGCAGAGTTATGAGAGGAAGCTAGCAGTCTTGAAGCAAGCTCTTTATGGCAACACTAGACATTAG 5505 0.3866 MSYYQSAERIPDPSWKYDVYLSFRGQDTRHGFTSHLYDALRRAGIHVFRDEVALGRGEQITYTLIQAIEASRLLVVVFSESYAGSRWCLDELMKIMECISTGGQTVIPVFYNVDPADVRHQRGPFGEAFQSHRFSYENEIVHAWRAALTEAANLSGFAITGDRNEAEMIGKIVKHITTLLASEDLFIAKHLVGVQSRTEDVIQELHSHKPEDVVLMGIWGMGGVGKTTIAKSVYNQIRHGFDRPMFLPNIREMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLKKVFLVLDDVNNIDQLNALCGSPEWFGAGSIIIITTRDRGLLRRIGVEYVYQVKEMDYNESLQLFCWNAFGKATPLTEFARLAEDVVKYCGGLPLALITIGCQLFGKMKDEWENVLGGLKRFPHPDVHKVLKISFDGLNDDREKEIFLDIASFCIGMEREEALQTLKDAFGLSEYGIGFLEEQSLITFDEKDRVRMHPLLRDMGREIVREQSQTDAQRRMYDVFVSFRGKDTRPTFTSHLHTSLQNAGITAYKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYSDSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKETDFGKAFESLISRRSVEEDKVQSWRTDLRERIKHSKDKRCSNTWDKRHGGVGKTTIAKAIYNKIRRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHISNIDSGKQILKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCRPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHAFKQACPKEEFVKLSTDVVEYSNGLPLALEVLGSHLFNMGIIEWQSALDTLKLIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKARNLVTVDNNMLGMHDLLRDMGRAIICEQSPELEERSRLWYDEKVLELLENHEGTDLKAKGLSLKLPMTNSICLSKEAFKNMTKLKLLQLAGVQPNGEFKHLSRYLRWMSWHGFPLRHTPIDCYQPNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSLISYTIGTLKNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCLKIDKLEEDVEQMESLAVLKADNTAIAQVPSALARLRNLGHVSLCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSNVFTYANWRPRLQIKGYVSLKTDNVANCNELGMDISEPKSSLNSLLIQMGVENSTTDILQKTILQNNELGDYLLPYDNNYPGLLTFSGEGSFVTFQVLHMNGRNLKSMMLHIVYYSTSSTFTTTEDLILENVQILNLSRDMSNVFKGDKLVSFKDEDREILMSSLEPGDTVRIVVALGSGFIVTKTIVYLIYDDEPPIEENLEHFNDDEDDIVCSTGDDVVASVNEGTLGVDVIAADYDEDVTVFGVHDAVAGMNEIVSGVDAMAKDEDGATVANVDDDMVANLDRNASTSGTDIMPPITNGFGANYVVATDINESSSSVDDNNDDDVAAIGDKMTGLIPLVQVPLDANTYSELTLTMMVSKDELHEDSDLLIAELDKTLSESYFLYPSPGSLELQSLSVISIFQKMQLLLDNELEALVGDVNIKNQLLGYVAQLGQIIGSSQVPKDLHSLVTEINHFYEDFLNDFPPVQEVLDNHERLIDSQNGLQEKLKAAKAKQGHFSASISKGKERVNEMSKEINELEVKLKALHEKRNRLQFNVKCCEFESININKNLETLIKENEEVVSTLKESESALRKAELSKQSYERKLAVLKQALYGNTRH* 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1978 1834 Gene3D Ribonuclease Inhibitor 967 1228 IPR032675 -
Ahy12g1978 1834 Gene3D - 179 342 IPR027417 -
Ahy12g1978 1834 PRINTS Disease resistance protein signature 215 230 - -
Ahy12g1978 1834 PRINTS Disease resistance protein signature 383 397 - -
Ahy12g1978 1834 PRINTS Disease resistance protein signature 560 576 - -
Ahy12g1978 1834 PRINTS Disease resistance protein signature 290 304 - -
Ahy12g1978 1834 SUPERFAMILY Toll/Interleukin receptor TIR domain 507 654 IPR035897 -
Ahy12g1978 1834 SMART till_3 513 655 IPR000157 GO:0007165
Ahy12g1978 1834 SMART till_3 16 154 IPR000157 GO:0007165
Ahy12g1978 1834 Coils Coil 1158 1178 - -
Ahy12g1978 1834 Gene3D - 672 796 IPR027417 -
Ahy12g1978 1834 Gene3D - 13 178 IPR035897 -
Ahy12g1978 1834 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Ahy12g1978 1834 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 655 IPR044974 GO:0006952
Ahy12g1978 1834 Coils Coil 1783 1827 - -
Ahy12g1978 1834 Pfam TIR domain 16 178 IPR000157 GO:0007165
Ahy12g1978 1834 Pfam TIR domain 514 661 IPR000157 GO:0007165
Ahy12g1978 1834 SUPERFAMILY "Winged helix" DNA-binding domain 419 506 IPR036390 -
Ahy12g1978 1834 SUPERFAMILY L domain-like 989 1371 - -
Ahy12g1978 1834 Pfam NB-ARC domain 197 416 IPR002182 GO:0043531
Ahy12g1978 1834 Pfam NB-ARC domain 673 866 IPR002182 GO:0043531
Ahy12g1978 1834 ProSiteProfiles TIR domain profile. 512 656 IPR000157 GO:0007165
Ahy12g1978 1834 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 509 IPR044974 GO:0006952
Ahy12g1978 1834 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 672 1425 IPR044974 GO:0006952
Ahy12g1978 1834 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Ahy12g1978 1834 SUPERFAMILY "Winged helix" DNA-binding domain 869 975 IPR036390 -
Ahy12g1978 1834 Gene3D - 480 656 IPR035897 -
Ahy12g1978 1834 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 509 - -
Ahy12g1978 1834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 673 894 IPR027417 -
Ahy12g1978 1834 Coils Coil 1737 1771 - -
Ahy12g1978 1834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Ahy12g1978 1834 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 524 655 - -
Ahy12g1978 1834 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 672 1425 - -
Ahy12g1978 1834 Coils Coil 1709 1729 - -
Ahy12g1978 1834 Gene3D - 800 883 IPR042197 -
Ahy12g1978 1834 Gene3D - 349 432 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1978 Ahy-Chr12 102181409 102194301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1978 192 515 WRKY Transcription Factor Family AT5G45050 36.086 2.37e-47 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1978 - - ahf:112727946 3620.48