Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1975 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTTTTTCAGTTTCCGAGGCCAAGACACTCGCCACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTTATGTTTTCATTGACGATGAGGTGGTGCTTGGGAGAGGAGACCAGATGACATACACACTGATTCAAGCAATCGAAGCTTCTAGACTTTTTGTTGTTATTTTGACAGAAAGTTATGCTGGTTCTAGATGGTGTCTGGACGAGTTGATGAAAATAATGGAGTGTAGAAGCACTATAGGTCAAACTGTCATTCCGGTATTCTACAATGTTGATCCCGAAGATGTACGCCACCAGAGTGGTCCTTTTGAAGAAGCTTTTCAAAGTCATAGATTCTCATATGAGAATGAGATAGTCCACGCATGGAGGGCTGCGCTCACTGAAGCTGCTAAACTTCCTGGATTTCTAATCACTAGAAACAGTAATGAAGTTGAAATTATCGGAGAGATTGTTGAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAGGCATCCAGTGGCAGTGCAATCTCGCACGGAAGATGTGATTCAACAGTTACATTCGCATAAACCAGAAGATGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACTATTGCGAAAAGTGTTTATAATCAAATTCGTCACGATTTTGATAGGCCAATGTTCCTCCCAAACATTCAGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGGAAAGCGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGCGGTAGTCGAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAAATCTGCTTCATATGATTGGAGTTGATTATGTGTACCAAATGACAGAAATGAATTACGATGAAGCTCTTGAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGATGATGTAGTTAAATATTGTGGGGGATTGCCATTGACCCTTAAACTAAGTGGTAGTCAATTGTTTGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTCGACTGAAAGGGTCTTCCCCTAAGGATATATTAGATGTTTTGAGACTAAGCTTTGATGCCTTAGATGATGACAAACAGAAAGAAATATTTCTTGACATAGCTAGCTTTTGTATTGGCATGGAAAGGGAGGAGGTACTGAAAACACTAAATTATGGCTTTGGAATTAGAGAACATGGAATTAGTTTCCTTGAAGAGCGGAATTTTATAAAATTTGATGAGAAAGACAGAGTTCAAATGCATCCTTTGCTGCGAGAGATGGGAAGAAATATCGTTCGAGAGCAATCACAAACTGATGCTCCGCGAAGGATTTACGATGTTTTCGTGAGTTTTCGAGGCAAGGACACTCGTACAACGTTTACATCACATCTCCATACATCTCTCCAAAATGCTGGAATTGCTGCTTTCAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATTGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCGTTGTTTTCTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCTATATTCTATGAAGTAGATCCCTCAGATGTACGTTATCAAAAGAAAGAGAGTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCAGTTGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAATGAAAGTGAAGATATCAAAAGAATTGTTGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCACATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGACAAAAGATGTTCTGATACTTGGGATAAAAGGCATGGGGGGCGTTGGTAAAACGACTATTGCCAAAGCCATCTATAACAAAATTGGTCGCGATTTTGATGGCAGGAGCTTCCTCCTTAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATACGTAACATTGATTCAGGGATGCAAATGTTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGATGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTTGTCCTGGGAGTGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGTCAAGCTATCTAAAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAAAAGAGTGGCAAAGTGCATTGAATACTCTGAAATCAATTCCCCCTGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAGGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGTGGACTCCATGCAGAAATTGGAATCAGTGCCCTCAAAGAGCGAAACCTTGTAACTGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAAACACCTGAACTTGAAGAGCGAAGTAGATTATGGTACGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGAGTTAAACGCTAAGGGATTGAGTTTGAAGTTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTAAGAATATGA 3186 0.3936 MSYYQSAERIPDPSWKYDVFFSFRGQDTRHGFTSHLYDALRRAGIYVFIDDEVVLGRGDQMTYTLIQAIEASRLFVVILTESYAGSRWCLDELMKIMECRSTIGQTVIPVFYNVDPEDVRHQSGPFEEAFQSHRFSYENEIVHAWRAALTEAAKLPGFLITRNSNEVEIIGEIVEHITTLLASEDLFIARHPVAVQSRTEDVIQQLHSHKPEDVVLMGIWGMGGVGKTTIAKSVYNQIRHDFDRPMFLPNIQEMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLESVFLVLDDVNNIDQLNALCGSREWFGAGSIIIITTRDRNLLHMIGVDYVYQMTEMNYDEALELFCWNAFGKATPLTEFARLADDVVKYCGGLPLTLKLSGSQLFGKMKDEWENVLGRLKGSSPKDILDVLRLSFDALDDDKQKEIFLDIASFCIGMEREEVLKTLNYGFGIREHGISFLEERNFIKFDEKDRVQMHPLLREMGRNIVREQSQTDAPRRIYDVFVSFRGKDTRTTFTSHLHTSLQNAGIAAFKDDDDVDGLQRGERISIALLKAIGLSACSVVVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKESDFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIGRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHIRNIDSGMQMLKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCCPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHAFKQACPKEEFVKLSKDVVEYSNGLPLALEVLGSHLFNMGIKEWQSALNTLKSIPPDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKERNLVTVDNNNMLGMHDLLRDMGRAIICEQTPELEERSRLWYDEKVLELLENHEGTELNAKGLSLKLPMTNSICLSKEALRI* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1975 1061 SMART till_3 514 659 IPR000157 GO:0007165
Ahy12g1975 1061 SMART till_3 16 155 IPR000157 GO:0007165
Ahy12g1975 1061 Gene3D - 12 185 IPR035897 -
Ahy12g1975 1061 Gene3D - 510 688 IPR035897 -
Ahy12g1975 1061 Gene3D - 186 343 IPR027417 -
Ahy12g1975 1061 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 509 - -
Ahy12g1975 1061 PRINTS Disease resistance protein signature 291 305 - -
Ahy12g1975 1061 PRINTS Disease resistance protein signature 561 577 - -
Ahy12g1975 1061 PRINTS Disease resistance protein signature 216 231 - -
Ahy12g1975 1061 PRINTS Disease resistance protein signature 384 398 - -
Ahy12g1975 1061 SMART AAA_5 213 351 IPR003593 -
Ahy12g1975 1061 SMART AAA_5 717 853 IPR003593 -
Ahy12g1975 1061 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Ahy12g1975 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 683 948 IPR027417 -
Ahy12g1975 1061 SUPERFAMILY "Winged helix" DNA-binding domain 923 1030 IPR036390 -
Ahy12g1975 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 507 661 IPR035897 -
Ahy12g1975 1061 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 524 1056 - -
Ahy12g1975 1061 Gene3D - 350 433 IPR042197 -
Ahy12g1975 1061 Gene3D - 854 937 IPR042197 -
Ahy12g1975 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 509 IPR044974 GO:0006952
Ahy12g1975 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 1056 IPR044974 GO:0006952
Ahy12g1975 1061 ProSiteProfiles TIR domain profile. 513 685 IPR000157 GO:0007165
Ahy12g1975 1061 Pfam TIR domain 16 179 IPR000157 GO:0007165
Ahy12g1975 1061 Pfam TIR domain 515 686 IPR000157 GO:0007165
Ahy12g1975 1061 Gene3D - 689 850 IPR027417 -
Ahy12g1975 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 444 IPR027417 -
Ahy12g1975 1061 Pfam NB-ARC domain 198 415 IPR002182 GO:0043531
Ahy12g1975 1061 Pfam NB-ARC domain 704 925 IPR002182 GO:0043531
Ahy12g1975 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1975 Ahy-Chr12 102087403 102092786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1975 203 516 WRKY Transcription Factor Family AT5G45050 34.277 1.83e-44 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1975 - - ahf:112727939 2099.71