Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1973 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTATTTGAGTTTCCGAGGCCCATACAGTCCCTACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTCATGCTTTCATTGACGATGAGGTGGTGTATGGGAGACGAGACCAGATGACATACACAGTGATTCAAGCAATCGAAGCTTCTAGACTTTTGGTTGTTGTTTTCTCAGAAAGTTATGCTGGTTCTAGATGGAGTCTGGACGAGTTGAAGAAAATAATGGAGTGTAGAAGCACTAGAGGTCAAACTGTCATTCCGCTATTCTACTATGTTGATCCCGAATATGTACGCCGCCAGTTAGGTCCAGCTTTTAGTCAAACATACTCATATGAGAATGAGATAGTCCACGCATGGAGGGCTGCGCTCACTGATGCTGCTAACCTTCCTGGAATTGTAATCAATAGAGGCAGTGATGAAGTTAACATTATCGGAGGGATTGTTGAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAGCCATCCAGTGGGAGTACAATCTCGCACGGAACATTTGATTCAACAGTTTCATTCTAATAAACTAGAAGACGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCCTCACGGTTTTGATAGGCCAATGTTCCTCCCAAACATTCGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGAAAAAGGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGTGGAAGTCCAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAGGTCTGCTTCGTATGATTGGAGTTGATTATGTGTACCAAGTGAAAGAAATGGATTACAATGAATCTCTTGAACTTTTTTGTTGGAATGCATTTGGGGAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGAAGATGTAGTTAAATATTGTGGGGGATTGCCATTGGCCCTTATAACAATTGGTTGTCAATTGTATGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTGGACTCAAAAGGTTTCCCCATCCGGATGTACACCAAGTTTTGAAAATAAGCTTTGATGGCTTAAATGATGACAGAGAGAAAGAAACATTTCTTGACATAGCTAGCTTTTGTATTGGCATGGAAAGGGGGGAGGTACTGAAAACACTAAATTATGGTTTTGGAATTAGCGAACATGGAATTAGTTTCCTTGAAGAGCGGAGTCTTATAACATTTGATGAGAAAGATAGAGTTCGAATGCATCCTTTACTGCGAGACATTGGAAGAGAAATCGTTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGAGGTACGATGTTTTTGTGAGCTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCGCATCTCCATACATCTCTCCAAAATGCTGGAATTACTGCTTTCAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCCATATTCTATGAAGTAGATCCCTCAGACGTACGTTATCAAAAGAAAGAGAGCGAGTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGGAGATCAGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAACGAAAGTGAAGATATCAAAAGAATTGTCGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGATAAAAGATGTTCTAATACTTGGGATAAAAGGCATGGGGGGCGTTGGTAAAACCACTATTGCCAAAGCCATCTATAACAAAATTCGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATAAGTAACATTGATTCAGGGAAGCAAATATTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTCGTCCTGGGAGCGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAACTTTTTAGCTGGCATGTATTCAAACAAGCATGTCCAAAAGATAAGTTTGTCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAAAAGAATGGCAAAGTGCATTGGATACTCTGAAATTAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAAGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGCGGACTCCATGCAGAAATTGGAATCAGCGCCCTTAAAGAGCGAAACCTTGTAACTGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAATCACCTGAACTTGAAGAGCGAAGTAGATTATGGTACGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGATTTAAAGGCTAAGGGATTGAGTTTGAAGTTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAATATGACTAAACTTGAATTGCTTCAACTCGCCGGTGTACAACCTAATGGAGAGTTCAAACATGTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGTTGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAATGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTGTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTTATGCAAAAATGTTCAAATGTTTTCACTTATGCAAATTGGCGTCCACGGCTTCAGATAAAAGGAGATGTATCTTTGAATACTGATAATGTGGCAAATTGCAATGAATTGGGGATGGATATTTCTGAACCAAAATTTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGAGATACTTCAACAGACTATTTTACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATAATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGGATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTACTATTCTACTTCTTCCACATTCGCTACAACAGGTCTGATTCTTGAAAATGTGCAAATCCTAAATCTCTCAAGGGACATGTCCAATGTATTTAAGGGAGATAAGTTAGCTTCATTCAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCATGCGGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGAAGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGAGGAAAACTTGGAGCACTTCAATGATGATGAGGATGATACTGTTTGTTCTACTGGTGATGACGTTGTAGCTTTTGTAAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATGATGATGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGCAGAAGATAAGGATGGTGTTACTGTTGCAAATGTTGATGATGATACGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGGAACTGATATAAATGAAAGTTCTTCAAATGTTGATGATAATAATGATGATGATGTTGCTGCCATTGGAGATAAAAATGTAAGTGATAATCTCTATGTTGCTTCCGTGGTAAAAAGACAGCAAGTTGAAGACATTTCAACCACCAAGACATCCGAGTCAAAGTCGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATACATCTTCTGAGCTTACATTAACCATGATGGTTTCAGAAGAAGATGAGCTTGATGAAGATAGTGATTTGCTTATTGCAGAGTTGGATAAAACATTGTCAGAGAGCTACTTTCTGTACCCGAGTCCTGGTTCATTAGAACTTCAAAGTCTCTCTGTAATTTCAATCTTCCAAAAAATGCAACTTCTTTTGGATAATGAACTAGAAGCCTTGGTAGGAGATGTTAACATCAAGAATCAGCTTCTTGGCTATGTGGCTCAATTAGGCCAAATAATAGAGTCATCACAAGTTCCTAAAGATCTTCACTCTTTGGTTACTGAGATTAGTCACTTCTATGAAGATTTTCTCAATGATTTTCCACCTGTTCAAGAAGTGTTAGACAATCATCAAAGATTGATCGACTCAAAGAATGGACTTCAAGAGAAGTTAAAAGCGGCTAAGGCCAAACAGGGACACTTTTCTGCTTCAATTTCTAAAGGAAAAGAAAGGGTCCATGAGATGTCAAAAGAAATCAATGAATTGGAGGTGAAACTAAAAGTCTTGCATGAGAAGAGGAATAGGTTACAATTCAATGTGAAATGTTGTGAGTTTGAATCTATAAACATCAATAAGAATTTGGAAATTTTGATAAAAGAGAATGAAGAGGTTGTGAGCACTCTCAAAGAATCAGAATCTGCATTCAGAAAGGCTGAGTTGTCAAAGCAGAGTTATGAGAGGAAGCTAGCAGTCTTGAAGCAAGCTCTTTATGGCAACACTAGACATTAG 5745 0.3876 MSYYQSAERIPDPSWKYDVYLSFRGPYSPYGFTSHLYDALRRAGIHAFIDDEVVYGRRDQMTYTVIQAIEASRLLVVVFSESYAGSRWSLDELKKIMECRSTRGQTVIPLFYYVDPEYVRRQLGPAFSQTYSYENEIVHAWRAALTDAANLPGIVINRGSDEVNIIGGIVEHITTLLASEDLFIASHPVGVQSRTEHLIQQFHSNKLEDVVLMGIWGMGGVGKTTIAKSVYNQIPHGFDRPMFLPNIREMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLKKVFLVLDDVNNIDQLNALCGSPEWFGAGSIIIITTRDRGLLRMIGVDYVYQVKEMDYNESLELFCWNAFGEATPLTEFARLAEDVVKYCGGLPLALITIGCQLYGKMKDEWENVLGGLKRFPHPDVHQVLKISFDGLNDDREKETFLDIASFCIGMERGEVLKTLNYGFGISEHGISFLEERSLITFDEKDRVRMHPLLRDIGREIVREQSQTDAQRRRYDVFVSFRGKDTRPTFTSHLHTSLQNAGITAFKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKESEFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKIKDVLILGIKGMGGVGKTTIAKAIYNKIRRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHISNIDSGKQILKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCRPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHVFKQACPKDKFVKLSTDVVEYSNGLPLALEVLGSHLFNMGIKEWQSALDTLKLIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKERNLVTVDNNNMLGMHDLLRDMGRAIICEQSPELEERSRLWYDEKVLELLENHEGTDLKAKGLSLKLPMTNSICLSKEAFKNMTKLELLQLAGVQPNGEFKHVSRYLRWMSWHGFPLRHTPIDCYQPNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSLISYTIGTLKNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCLKIDKLEEDVEQMESLAMLKADNTAIAQVPSALARLRNLGHVSVCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSNVFTYANWRPRLQIKGDVSLNTDNVANCNELGMDISEPKFSLNSLLIQMGVENSTTEILQQTILQNNELGDYLLPYDNNNPGLLTFSGEGSFVTFQVLHMDGRNLKSMMLHIVYYSTSSTFATTGLILENVQILNLSRDMSNVFKGDKLASFKDEDREILMSSLEPGDTMRIVVALGSGFIVKKTIVYLIYDDEPPIEENLEHFNDDEDDTVCSTGDDVVAFVNEGTLGVDVIAADDDEDVTVFGVHDAVAGMNEIVSGVDAMAEDKDGVTVANVDDDTVANLDRNASTSGTDIMPPITNGFGANYVVGTDINESSSNVDDNNDDDVAAIGDKNVSDNLYVASVVKRQQVEDISTTKTSESKSTGLIPLVQVPLDANTSSELTLTMMVSEEDELDEDSDLLIAELDKTLSESYFLYPSPGSLELQSLSVISIFQKMQLLLDNELEALVGDVNIKNQLLGYVAQLGQIIESSQVPKDLHSLVTEISHFYEDFLNDFPPVQEVLDNHQRLIDSKNGLQEKLKAAKAKQGHFSASISKGKERVHEMSKEINELEVKLKVLHEKRNRLQFNVKCCEFESININKNLEILIKENEEVVSTLKESESAFRKAELSKQSYERKLAVLKQALYGNTRH* 1915
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1973 1914 Pfam NB-ARC domain 700 918 IPR002182 GO:0043531
Ahy12g1973 1914 Pfam NB-ARC domain 195 412 IPR002182 GO:0043531
Ahy12g1973 1914 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Ahy12g1973 1914 Gene3D Ribonuclease Inhibitor 954 1285 IPR032675 -
Ahy12g1973 1914 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 521 1475 - -
Ahy12g1973 1914 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 28 507 - -
Ahy12g1973 1914 Gene3D - 508 678 IPR035897 -
Ahy12g1973 1914 PRINTS Disease resistance protein signature 1122 1138 - -
Ahy12g1973 1914 PRINTS Disease resistance protein signature 793 807 - -
Ahy12g1973 1914 PRINTS Disease resistance protein signature 716 731 - -
Ahy12g1973 1914 PRINTS Disease resistance protein signature 884 898 - -
Ahy12g1973 1914 Pfam TIR domain 511 679 IPR000157 GO:0007165
Ahy12g1973 1914 Pfam TIR domain 16 174 IPR000157 GO:0007165
Ahy12g1973 1914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 440 IPR027417 -
Ahy12g1973 1914 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 1475 IPR044974 GO:0006952
Ahy12g1973 1914 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 507 IPR044974 GO:0006952
Ahy12g1973 1914 Coils Coil 1863 1907 - -
Ahy12g1973 1914 SUPERFAMILY "Winged helix" DNA-binding domain 919 1026 IPR036390 -
Ahy12g1973 1914 Coils Coil 1817 1851 - -
Ahy12g1973 1914 Gene3D - 12 179 IPR035897 -
Ahy12g1973 1914 SMART AAA_5 713 849 IPR003593 -
Ahy12g1973 1914 SMART AAA_5 209 347 IPR003593 -
Ahy12g1973 1914 SUPERFAMILY L domain-like 1040 1394 - -
Ahy12g1973 1914 Gene3D - 850 933 IPR042197 -
Ahy12g1973 1914 Gene3D - 346 429 IPR042197 -
Ahy12g1973 1914 ProSiteProfiles TIR domain profile. 509 681 IPR000157 GO:0007165
Ahy12g1973 1914 Coils Coil 1209 1229 - -
Ahy12g1973 1914 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 153 IPR035897 -
Ahy12g1973 1914 Gene3D - 180 339 IPR027417 -
Ahy12g1973 1914 Gene3D - 679 846 IPR027417 -
Ahy12g1973 1914 SUPERFAMILY "Winged helix" DNA-binding domain 416 503 IPR036390 -
Ahy12g1973 1914 SMART till_3 16 151 IPR000157 GO:0007165
Ahy12g1973 1914 SMART till_3 510 655 IPR000157 GO:0007165
Ahy12g1973 1914 Coils Coil 1789 1809 - -
Ahy12g1973 1914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 679 944 IPR027417 -
Ahy12g1973 1914 SUPERFAMILY Toll/Interleukin receptor TIR domain 504 657 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy12g1973 Ahy-Chr12 101996378 102005775 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1973 14 502 WRKY Transcription Factor Family AT4G12020 28.081 3.66e-41 165