Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1972 ATGTCTGCTTCTTCCGAGTCCACAAGATGGATCTACGATGTATTCTTGAGCTTCAGGGGCAACGATGCTCGCAACCCATTCATCTTTCATCTCTACAACGCTCTCACCCAAGCCGCGATTCACGTCTTCAGGGACGACGAGGAGCTCCAGAGAGGAGACGAGATCTCCACCTCGCTGACTCGAGCCATCGAAGCTTCTAGAATCTCTCTTGTTGTCTTGTCACAAAACTTTGCGGCTTCCAAATGGTGCCTGCAAGAGTTGGAGAAAATAATGGAGTGCCATAGAACCATAGGCCAGAGGGCTATTCCGGTGTTCTATGATGTAGATCCAGCGGAGTTGCGCCATCAGAGAGGCACCATTGGAAGTGATTTGCAGTATCACATGGAAAGGTTCTCAGAGGAAAAAGTCAACGTCTGGAGGTCGGCGCTCCGGGACGTTGCTAACCTTTCAGGATTCGATTTGCAAAATTCCAGGAATCAAGCTGAGGATATCAATAGGATTGTAGAAAGTATCACTGCTTTGCTAGACAATACAATCTTGTTTGTTGCTCAACATCCTGTTGGAGTAGAGTCTCGTGTACAACATGTGATCAATCTGTTAAACTCCAACAGATCCGATAATGTTTTGATATTAGGAATATTGGGAATTGGGGGAATTGGAAAAACAACTATTGCCAAAGCCATTTACAATCAAGTTCATGGTTGTTTTGAGGGTTATTGCTTCCTTCCAAATATAAGAGAATTTTGGATGCAGAGTACTAGCCAAGTTCATTTGCAAGAACAGCTTCTTTCAAACATCTTCAAAGCTACAAAGATAAGGATACATAACATCGACTCTGGAAAAATTATATTACAACAAAGACTTTGTGGGAAAAAGTTGTTTCTTATCCTTGATGATGTTGATGAATTAGACCAACTAAATGCATTGTGTGGAAGTCGAGAATGGTTTGGTCCAGGTAGTAGAATAATCATCACAACAAGAAATGAACATCTTCTTAAAGTTCTTCAAGTTGATCACATTTCTAGGATGTCAATATTGGACCATGATGAATCTATTGAGCATTTTAGTTGGCATGCATTTAAGCAAAAATGTCCCAAGAGAGAATTTCTTGAACTTTCTAAGAAGGTAGTTGCCTATTGTGGGGGATTGCCACTAGCTCATGAGGTTATTGGGTCTTTGTTGTTTGATAGGATGGAAAAAGTGTGGGAAAGTGTATTGGAGAAACTCACAAGAATTCCTAACCATGAAGTGCAAAAGAAGCTAAGAATAAGTTTTGATAGTTTAGTTGATGATACAATCAAAGAAATTTTCCTTGACATAGCATTTTTCTTTATTGGGATGAGTCGAAATGATGTGATACACATTTTAGATGAATACAATGCTGAAATTGGAATAGACATCCTTATAGATCGAAGTCTTGTGACTGTTGACAACAATAACAAGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGAAATTGTTCGCGAGAAATATCCCAAAGAGCCAGAAAACCGTAGCAGGTTATGGTTACAAAAGGAAGTGATTGAAGTGCTACAAACACATATTGGGACAAGAGCAACTGAGGGACTAGTCTTGAAGTTGACAAGAACCAATACAATTTGTTTGGAGGCTAAAGCATTTAAAGAGATGAAAAAACTCAGATTGCTTCAACTTGTTGGTGTACAACTTGGCAGAGATTTTGAATATATCTCAAGAGATTTGAGATGGCTTTATTGGCATGGATTTCCTTTGAAAAACATACCACCAAACTTTTCTCAGGAAAATGTAGTTTCCATTGAGTTAGAATCCAGTTGTCTCAAATTAGTGTGGAAGGAACCGCAGTTTCTGGAGAAGTTGAAAATTCTGAATCTCAGTCATTCCCAAAACCTGAGACAAACCCCAAACTTTTCATACTTGCCAAATCTTGAAAAGCTGCTACTCAAAGATTGTTCAAGGTTGTCTACAATTTCAGACACGATAGGACATCTGAAAAAGATTCTTGTAATAAATTTAGAAGACTGCATTAGCCTTGGCAACCTGCCAAGAAGCTTTTATAAGTTGAAATCTCTGACCACTCTCATCATTTCCGGATGCTCAATGATTGACAAATTGGAAGAGGACTTGGAACAAATGGAGTCATTAATAACTTTAATTGCAGATAAGACTGCAATAACACAAGTGCCATTTTCAATAGTAAGATCAAAAAGCATTGGATATGTTTCTCTGTGTGGTTATGAAGGATTCTCACGTGATGTGTTTCCCTCTCTCATTTGGTCATGGATGTCACCAACAAATAATCTTTCATCTCTAGTTTCTGCCCCAGAACTTGTTTCCTTCTTAGATTTACCAAAGCTTCAATATCTTCAAGTAGAGTGCAACTCAGATCTTCAATTAGCTGAAGGTGTAACAAAAATTTTGGAAATATTGTATGCCACATACTACAATGAATTAGAAGCAATTCCAACAACATCACAAGTCTTGAATATTGAAACTTCAACAATAATTGATTTTCGCAGTGAATTTCAAATTAATGGATTAGTGAAGTCTCTTTTAATTGAAGTGGGAGCGAAGAGCCAAGTCAGTGGTATTCTTAAGGAAAGAATCTTACAGAAATTAAATACGAATGACCATGATCGTCAATCTGTGCTGCCCGGTGACAATTATCCTGATTGGTTGACCTTCAATAGCGAAGGTTCATCCATACACTTTAAAGTTCCTCACATTAACGGGCGTGACTTGAAGACAATGATGTTATGCGTTGTTTATTCTTCTTCCCAAGACACAATCTCATCAAAATGTCTTCAAAATGTGTTAATCATAAATTACACAAAGTATACCATTCAGGTCTATAAACGTGACACATTAGCCTCTCTTCAAAATGAGGACTGGCAATGCATAATTTCAACTTTGGAACCTGGAAACATTGTGGAGGTTCTTGTTCTTGTTTATGGCTTTGAATTTGTTGTGAAGAACACAACAATTTATCTCATATATAGTGAATCAACTAATGAGGAAATTGAGCATAGCAACAAAACAGGAGATAAGGATTCAACTTATGTGCCAGAAGTTAAGAATGTTGTTGCTTCGACTAGTGCTAAATCTAGATTGTGTGGAGCCTTGACTCTTGCTTCCTTTCTGATCTGGAAAAGTCGGCGATCTGGCAAACGAAGTTAA 3180 0.3824 MSASSESTRWIYDVFLSFRGNDARNPFIFHLYNALTQAAIHVFRDDEELQRGDEISTSLTRAIEASRISLVVLSQNFAASKWCLQELEKIMECHRTIGQRAIPVFYDVDPAELRHQRGTIGSDLQYHMERFSEEKVNVWRSALRDVANLSGFDLQNSRNQAEDINRIVESITALLDNTILFVAQHPVGVESRVQHVINLLNSNRSDNVLILGILGIGGIGKTTIAKAIYNQVHGCFEGYCFLPNIREFWMQSTSQVHLQEQLLSNIFKATKIRIHNIDSGKIILQQRLCGKKLFLILDDVDELDQLNALCGSREWFGPGSRIIITTRNEHLLKVLQVDHISRMSILDHDESIEHFSWHAFKQKCPKREFLELSKKVVAYCGGLPLAHEVIGSLLFDRMEKVWESVLEKLTRIPNHEVQKKLRISFDSLVDDTIKEIFLDIAFFFIGMSRNDVIHILDEYNAEIGIDILIDRSLVTVDNNNKLGMHDLLRDMGREIVREKYPKEPENRSRLWLQKEVIEVLQTHIGTRATEGLVLKLTRTNTICLEAKAFKEMKKLRLLQLVGVQLGRDFEYISRDLRWLYWHGFPLKNIPPNFSQENVVSIELESSCLKLVWKEPQFLEKLKILNLSHSQNLRQTPNFSYLPNLEKLLLKDCSRLSTISDTIGHLKKILVINLEDCISLGNLPRSFYKLKSLTTLIISGCSMIDKLEEDLEQMESLITLIADKTAITQVPFSIVRSKSIGYVSLCGYEGFSRDVFPSLIWSWMSPTNNLSSLVSAPELVSFLDLPKLQYLQVECNSDLQLAEGVTKILEILYATYYNELEAIPTTSQVLNIETSTIIDFRSEFQINGLVKSLLIEVGAKSQVSGILKERILQKLNTNDHDRQSVLPGDNYPDWLTFNSEGSSIHFKVPHINGRDLKTMMLCVVYSSSQDTISSKCLQNVLIINYTKYTIQVYKRDTLASLQNEDWQCIISTLEPGNIVEVLVLVYGFEFVVKNTTIYLIYSESTNEEIEHSNKTGDKDSTYVPEVKNVVASTSAKSRLCGALTLASFLIWKSRRSGKRS* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1972 1059 Gene3D - 345 429 IPR042197 -
Ahy12g1972 1059 SMART till_3 11 149 IPR000157 GO:0007165
Ahy12g1972 1059 Gene3D - 1 147 IPR035897 -
Ahy12g1972 1059 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
Ahy12g1972 1059 Pfam TIR domain 12 171 IPR000157 GO:0007165
Ahy12g1972 1059 PRINTS Disease resistance protein signature 380 394 - -
Ahy12g1972 1059 PRINTS Disease resistance protein signature 616 632 - -
Ahy12g1972 1059 PRINTS Disease resistance protein signature 210 225 - -
Ahy12g1972 1059 PRINTS Disease resistance protein signature 287 301 - -
Ahy12g1972 1059 ProSiteProfiles TIR domain profile. 10 175 IPR000157 GO:0007165
Ahy12g1972 1059 SUPERFAMILY "Winged helix" DNA-binding domain 416 521 IPR036390 -
Ahy12g1972 1059 SUPERFAMILY L domain-like 503 838 - -
Ahy12g1972 1059 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 997 IPR044974 GO:0006952
Ahy12g1972 1059 Pfam NB-ARC domain 190 423 IPR002182 GO:0043531
Ahy12g1972 1059 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 22 997 - -
Ahy12g1972 1059 Coils Coil 703 723 - -
Ahy12g1972 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 440 IPR027417 -
Ahy12g1972 1059 Gene3D - 156 340 IPR027417 -
Ahy12g1972 1059 Gene3D Ribonuclease Inhibitor 498 854 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1972 Ahy-Chr12 101980777 101995415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1972 12 733 WRKY Transcription Factor Family AT4G12020 29.032 3.61e-73 264